| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4160 |
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| Symbol | |
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| ID | 4245811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6420124 |
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| End bp | 6421143 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638109060 |
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| Product | daunorubicin resistance ABC transporter ATPase subunit |
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| Protein accession | YP_723639 |
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| Protein GI | 113477578 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.144366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACCAG CAGTTTTAAT AGAAAATCTT CAAAAAAGTT ATGGTTCATC CGTAGCAGTT
AAAGACGTTT CCTTTAAGAT AGAATCTGGA GAAATATTTG GTTTACTTGG CCCCAATGGT
GCTGGCAAAA CAACTACTCT ACGCGCTCTA TGTACACTAA TTACACCAGA TGCTGGACGC
TTAGAAGTAT CAGGTATTTC GGTGGTTGAC CAACCAAGAA TAGCCAGACA ACGCCTTGGG
TATGTTGCCC AAGAAGTAGC ATTAGACAAA GTATTAACAG GTCGAGAACT ACTGGAACTT
CAAGGAGCAA TATATCATAT CCCTAGCAAA CTGGCCAAAG AAAGAATCGA CAAAGTGATT
AGTCTTCTTG AGATAAAAGA CTGGGCAGAT AAAAAAACTG GTACTTACTC TGGTGGTATC
CGTAAACGTC TTGACCTAGC AGCAGGTTTG TTACATCAAC CAGATGTCTT AGTTTTAGAT
GAACCTACAG TCGGTTTAGA TATTGACAGT AGGGTAGCCG TATGGGATTT TTTGCGTCAG
TTACGCGACT CAGGCACAAC AGTTTTGATC ACTAGTCACT ATCTTGAAGA AGTGGATGCT
TTAGCAGACC GGGTAGCTAT TATTGATAAA GGGGTGGTTA TTGCAACTGG TACTCCTTCG
GAACTTAAAG ATCGAGTAGG AGGCGATCGC ATCACTTTGC GCATTAGAGA ATTTTCTCCT
GCTGAAGAAG CAGAAAGAGC TAAAACATTA CTGGCTCCCC TGCCAATAGT TCAAGAAGTT
ATTATCAATG CTGCTCAGGG CAATTCTTTA AACCTAGTTG TTACACCCCA GAGCGATGCT
TTAATCAAAA TTCAACGATC ATTACAAGAA GCTGGTTTAC CTATTTTTGG TATTGCTCAA
GCACGACCAA GTCTAGATGA CGTTTATTTA GCAGCAACAG GAAAAACCTT AATGGATGCA
GAATTAGCTG CTTCTAATAG TCGAGACTTA AAAGCAGAGA AAAAACAGAG CATGCGCTAG
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| Protein sequence | MTPAVLIENL QKSYGSSVAV KDVSFKIESG EIFGLLGPNG AGKTTTLRAL CTLITPDAGR
LEVSGISVVD QPRIARQRLG YVAQEVALDK VLTGRELLEL QGAIYHIPSK LAKERIDKVI
SLLEIKDWAD KKTGTYSGGI RKRLDLAAGL LHQPDVLVLD EPTVGLDIDS RVAVWDFLRQ
LRDSGTTVLI TSHYLEEVDA LADRVAIIDK GVVIATGTPS ELKDRVGGDR ITLRIREFSP
AEEAERAKTL LAPLPIVQEV IINAAQGNSL NLVVTPQSDA LIKIQRSLQE AGLPIFGIAQ
ARPSLDDVYL AATGKTLMDA ELAASNSRDL KAEKKQSMR
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