| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4118 |
|---|
| Symbol | |
|---|
| ID | 4245632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6352422 |
|---|
| End bp | 6353438 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638109019 |
|---|
| Product | prepilin-type cleavage/methylation-like |
|---|
| Protein accession | YP_723599 |
|---|
| Protein GI | 113477538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.29573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAACT TGCAAAAACT ACTAATAAAA GCCCTATCAA ATAGCAAGCT ACAAAAAGCC
AGCAATTTAA CAAGTGGTTT CACAATGACT GAACTGCTAG TAGCAACAGC TGTGGCGAGC
ATAATTATTG TACCAATATT GACCTTTGCC GTAGATATGC TCAACCGAGA TGTGGGGGAG
CAGGCAAAGG CTAACAGTGA GCAGGAGCTA CAAACGGCTA TTAGCTATAT TGCTCAGGAT
ATGAGTCAAG CGTTTTATGT TTATGAGCCT GACTATGTTG GAGAACCAGG CAAAACTCCT
CCTATCCCTA GCTATGATGA TTTTATTAAG CAACTACCGC ACTCTGAGGA TGAGGACAAA
GACCCTATCC TTGTTTTCTG GAAGCGAAAG TTTATAGAAC ATTCTATACC TATTGACGAT
AAGGATACGT CTATTAATTG TCCGGCAGAT GAAAATAAGT GTGACGACGG CTTTGTCCAG
TCGTTAGTTA TTTATTATTT AATAGAAGAG CAGGATAAGA ATAGCATCTG GTGTCAGCCA
TCTGGTAGTA GTTGCCCCAA GCGCATAGCT AGGTTTGAAA TACAGGATGG GGTAAAAGAT
TATTGGGGTA ACTATTTCTG TGGTACTGAC GGTCGCTCAG AAGAATGCTC AGGAAGTAAA
AAGAAATTTA AACGAGACTT GGGCTACACT TCCTATGATA ACAGTAATCC TACTGGCTGG
ACTAAAAAAG AAGGTGAAGA CTACAGTAAC AGCCCGGTTG TATTAGTAAA TTACATAGAA
GACTTTACCC TAGACTCGGC AAGTGACTAT ACAAAAGACT CTGAAATAAA GCAAACAGAA
TTAGCAAAAG GTAAAACGCT AGCTAGAGTC ACAATTCTAG GTAATGCTAT GCGCCGCCGT
CGAGATGGCT TCAGTTGCAT AGAAGACAAT TCGACAACTC CTCCAACGTA TAAAAAATCT
CCATATTGTC CAAAAGCAAC TGCACAAGTG GGACCGCGTA GTGGCTTTGG GGAATAG
|
|---|
| Protein sequence | MYNLQKLLIK ALSNSKLQKA SNLTSGFTMT ELLVATAVAS IIIVPILTFA VDMLNRDVGE
QAKANSEQEL QTAISYIAQD MSQAFYVYEP DYVGEPGKTP PIPSYDDFIK QLPHSEDEDK
DPILVFWKRK FIEHSIPIDD KDTSINCPAD ENKCDDGFVQ SLVIYYLIEE QDKNSIWCQP
SGSSCPKRIA RFEIQDGVKD YWGNYFCGTD GRSEECSGSK KKFKRDLGYT SYDNSNPTGW
TKKEGEDYSN SPVVLVNYIE DFTLDSASDY TKDSEIKQTE LAKGKTLARV TILGNAMRRR
RDGFSCIEDN STTPPTYKKS PYCPKATAQV GPRSGFGE
|
|---|
| |