Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4112 |
Symbol | |
ID | 4245626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6343754 |
End bp | 6344590 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638109013 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_723593 |
Protein GI | 113477532 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.467729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGTTTC AATCAGCTAC AGAAATTATT CAAGCTTATC AGCAAGATAA AAATCTTATT GCTAGTAATT TAGAAGGTAT AGATATTAGT GAAATTGAAC TATATGAAGT TAATCTGAGC AAAAGTAATT TACGACAAGC TAAGTTACAT AATACTATTC TTATTGGAGC TAACTTAATT GAAGCTGACT TGAGTGGAGT TAACCTTAAA GGTGCTGATT TACGTGGAGC TAACCTTCAA GGTGCGAACT TGAATGGGGC AGATTTAACT AATACTTATT TGAATAGAGC TGAACTACAA AATGCTAATT TTACTAACGC TAATTTAGAA GGTGCTAAAT TACAGGTAGC ATACTATGAT AGTTACACTG TTTGGCCTGA AGGATTTCCT TACAAAAAAT CAGGTGCAGT TGGACCTGGG GCGAACTTAA GCGGAGCTTT CTTAAATACA GCTGATCTTA AAGGTGCTGA CTTACGGGGT GCAAATTTGC GAGGTTCTTA TCTGAGTGGT GCTGACTTAC GGGGTGCAAA TTTGCAAGGT GCGGCTTTGA GCGGGGCAAA TATGAAGGGG GCTTTTTTGA TAGGTGCTAA CTTGCGTGAT GCTCTCCTGA ATGCTGTGGA GCTGGAAGGG GCAGATTTGC GAGCGGCTGA TTTAACGGGG GCAAGTTTCA ATAATGTTAT TAGTATTGCT GGAGTTGATT TTACTCTAGC GCAGGGATTG AGTGATGATG TTAGGGGTAT GTTATGTGCA TATCCAGGTA AAGATTTGGG TACTTGGAAT TCTTTTACTC GCACTAATAC ACAGAGTAGT TTATTATCCC ACTTAACTGA TCTGTGA
|
Protein sequence | MQFQSATEII QAYQQDKNLI ASNLEGIDIS EIELYEVNLS KSNLRQAKLH NTILIGANLI EADLSGVNLK GADLRGANLQ GANLNGADLT NTYLNRAELQ NANFTNANLE GAKLQVAYYD SYTVWPEGFP YKKSGAVGPG ANLSGAFLNT ADLKGADLRG ANLRGSYLSG ADLRGANLQG AALSGANMKG AFLIGANLRD ALLNAVELEG ADLRAADLTG ASFNNVISIA GVDFTLAQGL SDDVRGMLCA YPGKDLGTWN SFTRTNTQSS LLSHLTDL
|
| |