| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4110 |
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| Symbol | |
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| ID | 4245624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6340300 |
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| End bp | 6342288 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638109011 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_723591 |
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| Protein GI | 113477530 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components
[COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.580114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTATTT TGAATTATTT ATCTTATTAC TTGATCACTG AAACTCAAGG AGGATTAAAC
AATTTATTGA ACCCTTTCGA GTCTTATACT TTACCCCTGG AGGAATGGGT TAACAATTTA
GTTGATTTTC TGGTTGACAA CTTTCGGTTT ATATTCCAAG CTATCAGCTT ACCTATTAGC
GGAACTCTAA GAATAGTAGA ATTGACTTTT CTAGCAATTC CGCCTTTAAT TTTTCTCATT
ATCACTGGTT TGCTGGTCTG GCAATTAGCA GGTAGAAAAA TAGCTATATA CAGTTTTATT
TCTCTTTGTA TTATTGGTTT TTGTGGTGCT TGGGAACAAT CAATGGTTTC CCTATCTTTA
ATACTTACTG CTGTAATATT CTGTATGCTT ATTGGTATAC CTCTAGGTAT TGCTTGTGCC
CTGAGCGATC GCTTTAATAA AATCTTGCGA CCTCTCCTAG ATGGGATGCA AACTCTTCCA
ACTTTTGTTT ATCTGGTACC TGTAGTAATG CTATTTGGTA TTGGCGAAGT TTCTGGTATA
ATAGCGACTT TTGTTTTTGC AGTTCCTCCT CTAATTCGCC TGACCAACCT GGGCATTAGA
CAGGTGTCCC CAGAAGCGGT AGAGGCTGCA CTTGCGTTTG GTTCAACTCG CCAACAAGTT
TTGTTGGAAG TGCAAATACC TCTAGCTTTA CCTACTATAC TTGCTGGTAC GAACCAAGCC
ATTTTATTAG CCTTATCGAT GTCAGTTGTC ACCTCAATGA TTGGAGTAGA GGGATTAGGA
CAAATGGTAT TACAAGGTTT AGGACGTTTG AATGTGGGAC TAGCGGCAAT AGGGGGCTTA
GGTATTGTAT TAATTGCTAT AATGTTAGAC CGTATTACTC AAGGTGTTAG TCAAGGTAAT
ATTCAGTCTT GGCAAGACCG TGGTCCTATC GGTTGGTGGC GGTCTCGTAA GTTTTTCAAA
CATCATAAAA CAACTTTAGG GATAAGTATT CTGCTTGCCT TGTTAGTTGG TGTGACAGGT
TGGCAATTAA TGTCTCAAAA AAATATCAAG TCAACTGAGC ATCTACTGCC AGGGGAAGGA
GTAGTGGTGC GTCCAACTTC TGGCTTAGAA ACCTACGGTA TATTCACCAC AGAAATTGTG
AATATTGGAC TGGAAAAATT AGGATATGAG ATAAGAGGTG AAAAGCAACT GAATGTTCCA
GCAATGCATC TGGCTGTTAG CAATGGAGAT TTAGATTTTG CTGGAACCCA TTGGGAAGCT
AGCCATCAAG AATTTTTTGA CAATAATGGT GGGGAAGAAA AATTAGAACG GCTAGGAACT
CTGATTTCTA ATTCTACTAT GGGGTATCAG ATAGATAAAA AAACAGCAGA TAAGTACAAT
ATTACTAATA TATCACAACT TAAAGAACCA AAAATTGCTA AACTTTTTGA CTCTGATGGT
GATGGTAAGG CAAATTTAAT TGGTTGTACT GCTGGTTGGT CGTGCGAAAG AGTCATAAAT
CATCATTTAG AGGTTTATGG ACTTGAAGAT ACTGTTGAGC AAATTCAAGG AAATTATTCT
TCTTTGTTGG CAGATATTTT AGTTCGTTAT CGTCAAGGAA AACCAATTTT ATTTTTTGCT
TGGAAACCCC ATTGGTTTTC TTCTATTTTA AGAGAAGGAG AAAATGTAGA ATGGTTGAGT
GTTCCTTTTA CATCTTTGGT AGGAACTATG GAAAACTTCA CGGAAAAAGA TACTTTATTT
AATGATAAAA ATATCGGTTT TCCTATTGAT AATGTCAGGA TATTAGCTAA TAAGAAATTC
TTGAAGGCTA ACCCAGTTGC TAAACGTTTA TTTGAACAGA TTGAGATTCC TTTAGAGGAT
GTTAGTATTG AACAGGAAAA AGTAAAAAAT GGAGAAAATA AACCTATTGA TATTCGCCAT
CATGCTGAGG AATGGATAGT TAATCATCAA GGGTTATTTG ATAGTTGGTT AGAAATAGCA
AAAAGTTAA
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| Protein sequence | MFILNYLSYY LITETQGGLN NLLNPFESYT LPLEEWVNNL VDFLVDNFRF IFQAISLPIS
GTLRIVELTF LAIPPLIFLI ITGLLVWQLA GRKIAIYSFI SLCIIGFCGA WEQSMVSLSL
ILTAVIFCML IGIPLGIACA LSDRFNKILR PLLDGMQTLP TFVYLVPVVM LFGIGEVSGI
IATFVFAVPP LIRLTNLGIR QVSPEAVEAA LAFGSTRQQV LLEVQIPLAL PTILAGTNQA
ILLALSMSVV TSMIGVEGLG QMVLQGLGRL NVGLAAIGGL GIVLIAIMLD RITQGVSQGN
IQSWQDRGPI GWWRSRKFFK HHKTTLGISI LLALLVGVTG WQLMSQKNIK STEHLLPGEG
VVVRPTSGLE TYGIFTTEIV NIGLEKLGYE IRGEKQLNVP AMHLAVSNGD LDFAGTHWEA
SHQEFFDNNG GEEKLERLGT LISNSTMGYQ IDKKTADKYN ITNISQLKEP KIAKLFDSDG
DGKANLIGCT AGWSCERVIN HHLEVYGLED TVEQIQGNYS SLLADILVRY RQGKPILFFA
WKPHWFSSIL REGENVEWLS VPFTSLVGTM ENFTEKDTLF NDKNIGFPID NVRILANKKF
LKANPVAKRL FEQIEIPLED VSIEQEKVKN GENKPIDIRH HAEEWIVNHQ GLFDSWLEIA
KS
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