| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4109 |
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| Symbol | |
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| ID | 4245623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6338712 |
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| End bp | 6339935 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638109010 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_723590 |
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| Protein GI | 113477529 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGACA AAATAATTAA TACAAATCCA TTAAAGTCTA AAATAATTAT ACAAAATCTA
ATTAAAATCT ACGGTAAAAA ACATCGTGCT GCTCTTAAAT TATTTCGGGA GGGAAAAACA
AGGGACGATA TATTACAGTC TACAGGTAAT GTTTTGGGAT TAGCTGATGT ATCTATTGAT
ATTGGTACAG GGGAATTATT TGTGGTAATG GGGTTATCTG GTTCGGGAAA GTCTACCCTA
GTTCGCTGCA TTAATCGTTT AGTTGATCCG ACAAGTGGAC ATATTTATAT TGATGGTGAA
GATATTGCTC ATGCTGATGA GAAACGGATG CGAGATATAC GACTGAATAA AGTTTCGATG
GTATTTCAAC GCTTTGGGTT ATTTCCTCAC AAAACAGTAG CGGAAAATGT AGAGTATGGC
CTAAAGGTAC GGGGGGTTTC AACAACTCAT CGTCGTCAGA AAGCTTTAGA AACATTGGAG
GTTGTTGGTT TAGAGAAATG GGCAAATTAT CAACCTACTT CTTTGAGTGG GGGAATGCAG
CAACGGGTGG GTTTGGCTCG TGCTTTGGCG ACTGATGCAG ATATTTTATT GATGGACGAA
GCTTTTAGCG CTCTTGACCC ACTGACTAGG GGAGAGATGC AGGATGAATT GTTACGACTT
CAGAAAGAAT TGCATAAGAC TATAGTTTTT ATTAGCCATG ATATGCAAGA AGGTTTGAAG
TTGGGCGATC GCATTGCGGT TATGAAAGAT GGTGCAATTG TCCAATTGGG GACTCCTGAA
GAATTAGTTA CTAATCCTAA AAATGATTAT ATTAAGGCTT TTACTGAAGA AGTAAATTCA
GCACAAGTTA TTACGGTAGG GTCAATTATT AGTAAAAGAA CTTCCCTGAT AATTGGTCAA
AATTCTGTTA GCTATGGTTT GGAGGAAATG TTAAAGGATA ACCTTCAACT TTTGTATGTA
GTTGATGAGT ACAATAAACC TATTGGTTTG TTGAAAAGAG AAGGTTTGCA AGAGTTTATC
AAACAGGGAG AGGAAGATTT TAGGGCAATT ATGGAAACTG ATTTTCCGAT AGTCAATAGT
TCTACTCCCT TGGAGGATAT TTTTTACCTT TACAAACAGG GTTTTCCTCT GGCGGTGGTT
AATGACAAAA AAGAATTTCA AGGTATGGTA GAGGCAGTTG ATGTACTGAC GAGTTTGGGA
AAACCAAATA AAAATTATGG TTAA
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| Protein sequence | MNDKIINTNP LKSKIIIQNL IKIYGKKHRA ALKLFREGKT RDDILQSTGN VLGLADVSID
IGTGELFVVM GLSGSGKSTL VRCINRLVDP TSGHIYIDGE DIAHADEKRM RDIRLNKVSM
VFQRFGLFPH KTVAENVEYG LKVRGVSTTH RRQKALETLE VVGLEKWANY QPTSLSGGMQ
QRVGLARALA TDADILLMDE AFSALDPLTR GEMQDELLRL QKELHKTIVF ISHDMQEGLK
LGDRIAVMKD GAIVQLGTPE ELVTNPKNDY IKAFTEEVNS AQVITVGSII SKRTSLIIGQ
NSVSYGLEEM LKDNLQLLYV VDEYNKPIGL LKREGLQEFI KQGEEDFRAI METDFPIVNS
STPLEDIFYL YKQGFPLAVV NDKKEFQGMV EAVDVLTSLG KPNKNYG
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