Gene Tery_4105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4105 
Symbol 
ID4245619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6332733 
End bp6333494 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content36% 
IMG OID638109006 
Productphycobilisome linker polypeptide 
Protein accessionYP_723586 
Protein GI113477525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0449765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.555714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTT GGGTAGAAAA AATCGATCCA ATAGAACTAC GTTGGAATGC AACACAAGAT 
GAAAAACAAG CTGTAATTAG AGCTGTTTAT AAGCAAGTTT TGGGAAATAT CCATGTAATG
GAAAGCCAGC GTCTAATTAG CGCCGAATCA TTGTTCATAG GTGGAGAATT TTCTGTCCGT
CAATTTGTTA ATATGGTTGC TCAATCAGAC TTATATTTCT CCTTGTTTTT TGAATCATGT
TCTCCTTATA GATTTGTAGA ACTAAACTTT AAGCATTTGT TAGGTCGTGC CCCCCAAGAC
CAGGCAGAAA TTTCTCAACA CATTTGTATA TATAATGAAA AGGGATACGA AGCAGAAATT
AATTCTTACA CAGACAGTTA TGAGTATCTT CAAAACTTTG GGGAAAACAT TGTTCCATAT
CCACAAGGTA CTAGTACTGT AGTTGGGATG AAAAATATCA CATTTAATAG GACATTTGCT
TTGGAACGAG GAAATGCTAC AAGTGATAGA AACAAACCTT CCCAATTGAC TTTAGATTTA
GGTGCTAATT TGAGCACAAA GATTCAAAAA CCTGCTACTG TAGGTGGGCC GTATAATAAC
AGAGTTAAAC GTTTCCAAAT CTCAGTTACC AAAACTGGTA TTGGGCCTGT TGTGAAGAAG
AGCGCGACAA CTTATACAGT ATCTTACGAA CAGTTAAGTT CAAAAATCAA CAGTATCCAA
AGAACAGGTG GTAAAATCTT AAAAATTACT GAGGTTCCTT AG
 
Protein sequence
MSLWVEKIDP IELRWNATQD EKQAVIRAVY KQVLGNIHVM ESQRLISAES LFIGGEFSVR 
QFVNMVAQSD LYFSLFFESC SPYRFVELNF KHLLGRAPQD QAEISQHICI YNEKGYEAEI
NSYTDSYEYL QNFGENIVPY PQGTSTVVGM KNITFNRTFA LERGNATSDR NKPSQLTLDL
GANLSTKIQK PATVGGPYNN RVKRFQISVT KTGIGPVVKK SATTYTVSYE QLSSKINSIQ
RTGGKILKIT EVP