Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4105 |
Symbol | |
ID | 4245619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6332733 |
End bp | 6333494 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638109006 |
Product | phycobilisome linker polypeptide |
Protein accession | YP_723586 |
Protein GI | 113477525 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0449765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.555714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTTT GGGTAGAAAA AATCGATCCA ATAGAACTAC GTTGGAATGC AACACAAGAT GAAAAACAAG CTGTAATTAG AGCTGTTTAT AAGCAAGTTT TGGGAAATAT CCATGTAATG GAAAGCCAGC GTCTAATTAG CGCCGAATCA TTGTTCATAG GTGGAGAATT TTCTGTCCGT CAATTTGTTA ATATGGTTGC TCAATCAGAC TTATATTTCT CCTTGTTTTT TGAATCATGT TCTCCTTATA GATTTGTAGA ACTAAACTTT AAGCATTTGT TAGGTCGTGC CCCCCAAGAC CAGGCAGAAA TTTCTCAACA CATTTGTATA TATAATGAAA AGGGATACGA AGCAGAAATT AATTCTTACA CAGACAGTTA TGAGTATCTT CAAAACTTTG GGGAAAACAT TGTTCCATAT CCACAAGGTA CTAGTACTGT AGTTGGGATG AAAAATATCA CATTTAATAG GACATTTGCT TTGGAACGAG GAAATGCTAC AAGTGATAGA AACAAACCTT CCCAATTGAC TTTAGATTTA GGTGCTAATT TGAGCACAAA GATTCAAAAA CCTGCTACTG TAGGTGGGCC GTATAATAAC AGAGTTAAAC GTTTCCAAAT CTCAGTTACC AAAACTGGTA TTGGGCCTGT TGTGAAGAAG AGCGCGACAA CTTATACAGT ATCTTACGAA CAGTTAAGTT CAAAAATCAA CAGTATCCAA AGAACAGGTG GTAAAATCTT AAAAATTACT GAGGTTCCTT AG
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Protein sequence | MSLWVEKIDP IELRWNATQD EKQAVIRAVY KQVLGNIHVM ESQRLISAES LFIGGEFSVR QFVNMVAQSD LYFSLFFESC SPYRFVELNF KHLLGRAPQD QAEISQHICI YNEKGYEAEI NSYTDSYEYL QNFGENIVPY PQGTSTVVGM KNITFNRTFA LERGNATSDR NKPSQLTLDL GANLSTKIQK PATVGGPYNN RVKRFQISVT KTGIGPVVKK SATTYTVSYE QLSSKINSIQ RTGGKILKIT EVP
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