| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4096 |
|---|
| Symbol | |
|---|
| ID | 4245609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6316470 |
|---|
| End bp | 6317687 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638108996 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_723577 |
|---|
| Protein GI | 113477516 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0791445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTG GAGAAATACC TCAAGGAGAA AAACCAAGTA ATAAAATCAC AAAAATTTGC
ATATTGGGTA GTGGCTTTGG TGGTCTTTAC ACGGCATTGT ATCTGAATAG TTTTTGGGGT
TTTAAACATA AAAATTGTGA AGTTATATTA ATAGATCAAC ATGATCATCT TGTTTTTACT
CCCCTACTGT ATGAGGTAAT TACAGATGAA CTCCAAACTT GGGAAATAGC TCCCTCTTTT
GCTAAACTTC TACAAAATAA GAAAATACTT TTTTGTCAAG ATACGATTCA AAATATTGAT
TTTAAAGCTC GTAAAGTTAA ACTTTTAGAA CAAGGAAGTT TAGCTTATGA CTACTTAGTT
ATTACGGTGG GTGTTACTAA TGGAAAATTA CCAACTACTG CAGAAAATGT TTTAACATTC
CGAACTTTAG CTGATGCTCA AATATTAGAG AAAAAACTAC AAACTTTGGA AAATTCTAAT
CAAGAATTAA TTCGAGTATC TATTGTGGGT GGTGGTCCAA GTGGAGTAGA GTTGGCAGGA
AAAATAGCAG ATAGATTAGG AAGACGAGGA GAAATACGCT TAATAGAAAG AGGAAAAGAA
ATACTAAAAA ACTTTACTCC AGCTACTCGT AAAAATGCTC AACGTGCTTT AGATAAACGA
AATGTTTTAA TAAGTTTAGA GACAACTGTT GATACTATTG AAGTTGACAA AATTACTTTA
TGGCAGTCTA ATGAAAGTGT TATTATTCTA ACAGATTTGG TACTGTGGAC TGCAGGTACT
CAAGTAAGAG AGTGGGTTAA AAATTTGAAT TGTTACCACA ATTCTAGAGG TCAACTTATT
TGCGAGCAAA CTTTACAATT AGTTGGCTAT TCAGAAGTTT TTGCCTTGGG AGATATTGCT
GAGATTTTAT ATCCCAATGG TAAAAAACTT CCAGCTACAG CTCAAGTTGC TTATCAACAA
GCAAGTCAAG CAGCAAAAAA TCTCTGGGCA ATTTTAAATA ATAAACGTCC CAAACCTTTT
CGTTATTTAC ACTTAGGAGA AATGATTACT TTGGGAGTAA ATTCTGCTGC TGTTTCGAGT
TTTGGTATTA GTTTGCATGG TTGGTTAGCT GCTTTAGTGA GACTTAGTGT TTATTTACAA
CGTTTACCGA CTTTTTCTCA TGGTTTTCAG GTTTTATGTA ATAGATTGAA AATTTGGCTA
GCTAAAAGGA AAAGATAA
|
|---|
| Protein sequence | METGEIPQGE KPSNKITKIC ILGSGFGGLY TALYLNSFWG FKHKNCEVIL IDQHDHLVFT
PLLYEVITDE LQTWEIAPSF AKLLQNKKIL FCQDTIQNID FKARKVKLLE QGSLAYDYLV
ITVGVTNGKL PTTAENVLTF RTLADAQILE KKLQTLENSN QELIRVSIVG GGPSGVELAG
KIADRLGRRG EIRLIERGKE ILKNFTPATR KNAQRALDKR NVLISLETTV DTIEVDKITL
WQSNESVIIL TDLVLWTAGT QVREWVKNLN CYHNSRGQLI CEQTLQLVGY SEVFALGDIA
EILYPNGKKL PATAQVAYQQ ASQAAKNLWA ILNNKRPKPF RYLHLGEMIT LGVNSAAVSS
FGISLHGWLA ALVRLSVYLQ RLPTFSHGFQ VLCNRLKIWL AKRKR
|
|---|
| |