| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4082 |
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| Symbol | |
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| ID | 4242110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6300673 |
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| End bp | 6301437 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638108983 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_723564 |
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| Protein GI | 113477503 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.224572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000308318 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGATTAT TTGATCGGAT TAGTCGTATC GCTAGAGCTA ATGTTAACGA TATAGTAAAT
AAGGCTGAAG ATCCTGAAAA GGTTCTAGAA CAGTCTATTA TTGATATGCA AGAAGACTTG
GTTCAGTTGC GCCAGGCAGT TGCTAGTGCT ATTGCTACTC AGAAGCGCAC CCAACAACAG
CACAAACAAG CTGAGTCTCA AGCTCAGCAA TGGTACTCCC GAGCAGAGTT AGCTCTGAAA
AAGGGAGATG ATAATTTGGC AAAGGAAGCT CTACAGCGTA AGACAACTTA TTCTGATACT
GCTAGCACTA TAAAAGTATC TTTAGAGAGT CAAACATCTC AGGTGGAAAC CCTAAAAAGA
AATCTAACAG CTTTAGAAGG CAAGATTTCT GAAGCTAAGG CTAAGAAAGA TATTTTGAAC
GCGAGATTAA AAGCTGCTAA AACTCAGGAG CAACTAAATA ACACAATAGG TTCTCTTAAT
ACTAGCGGGG CAATGGCCGC TTTTGACAGG ATGGAAGAAA AGGTACTTCA AATGGAGGCT
CGTTCCCAAG CTTCAGCAGA ATTAGCTGGT GCTGGCTTAG AAGAGGATTT TCGACAGTTA
GAAGCTAATA GTGATGTTGA TGATGAGTTG GCAGCGATGA AAGCAAAACT GGTAGGGGGT
TCAGTAAACC AGAGTCAATT ACCAGCTTCA TCACAAGGGT CAGTAGAAAA ACCGGTTGTT
GATGATGAAC TAGAGGATTT ACGTAAACAA CTTGACAAAA TGTAA
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| Protein sequence | MGLFDRISRI ARANVNDIVN KAEDPEKVLE QSIIDMQEDL VQLRQAVASA IATQKRTQQQ
HKQAESQAQQ WYSRAELALK KGDDNLAKEA LQRKTTYSDT ASTIKVSLES QTSQVETLKR
NLTALEGKIS EAKAKKDILN ARLKAAKTQE QLNNTIGSLN TSGAMAAFDR MEEKVLQMEA
RSQASAELAG AGLEEDFRQL EANSDVDDEL AAMKAKLVGG SVNQSQLPAS SQGSVEKPVV
DDELEDLRKQ LDKM
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