| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4081 |
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| Symbol | |
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| ID | 4242109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6299635 |
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| End bp | 6300399 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638108982 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_723563 |
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| Protein GI | 113477502 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.537261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00031127 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGATTAT TTGATCGGAT TAGTCGTATC TTCAGAGCTA ATGTTAATGA GATGGTCAAT
AACGCTGAAG ACCCTCAAAA GATTTTAGAA CAGTCTATTC TTGATATGCA AGAAGACTTG
GTTCAGTTGC GCCAAGCAGT TGCTAGTGGT ATTGCTACTC AGAAGCGCAC CCAACAACAG
TACAACCAAG CTGAGTCTCA AGCTAAACAA TGGTACTCCC GAGCACAGTT AGCTCTGCAA
AAGGGAGATG AAAATTTGGC AAAGGAAGCT CTACAGCGTA AAAATACTTA TTCTCAGACA
GCTAACACTA TAAAAGTATC TTTAGAGAGT CAAACATCTC AGGTGGAAAC CCTAAAAAGA
AATCTAACAG CTTTAGAAGG CAAGATTTCT GAAGCTAAGG CTAAGAAAGA TATTTTGAAC
GCGAGATTAA AAGCTGCTAA AACTCAGGAG CAACTAAATA ACACAATAGG TTCTCTTAAT
AATAGCGGAG CAATGGCTGC TTTTGAACGG ATGGAAGAAA AGGTGTTTCA AATGGAGGCT
CGTTCCCAAG CTTCAGCAGA ATTAGCTGGT GTTGGCTTAG AAGAGGATTT TCGAAAGTTA
GAAGCTAGTA GTGATGTTGA TGATGAGTTG GCAGCGATGA AAGCAAAACT GGTAGGGGGT
TCAGTAAACC AGAGTCAATT ACCAGCTTCA TCACAAGGGT CAGCAGAAAA ATCGGTTGTT
GATGATGAAC TAGAGGATTT ACGTAAACAA CTTGACAAAA CGTAA
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| Protein sequence | MGLFDRISRI FRANVNEMVN NAEDPQKILE QSILDMQEDL VQLRQAVASG IATQKRTQQQ
YNQAESQAKQ WYSRAQLALQ KGDENLAKEA LQRKNTYSQT ANTIKVSLES QTSQVETLKR
NLTALEGKIS EAKAKKDILN ARLKAAKTQE QLNNTIGSLN NSGAMAAFER MEEKVFQMEA
RSQASAELAG VGLEEDFRKL EASSDVDDEL AAMKAKLVGG SVNQSQLPAS SQGSAEKSVV
DDELEDLRKQ LDKT
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