| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4072 |
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| Symbol | |
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| ID | 4242100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6286709 |
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| End bp | 6288205 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638108975 |
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| Product | isochorismate synthases |
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| Protein accession | YP_723556 |
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| Protein GI | 113477495 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.108156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000687043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGCCTGTAA CACCAACTTC TGTTAATCTA TTTCAGACTT ACCAAGATCT GTATCAATTT
CTGTTTAATT GTCAACAGAC ATTAACAGAC AATATGCAAA CAAAAATAAT TAGTATTTCT
CGAGAAATAT TATCAGTAGA TCCCCTAGCA GTATTGCAAA AAATTTGTCA ACCACATCAA
CTACATTTTT ATTTAGAAAA ACAAGCCATT GGAGAAAAAA ACATCCACAA AAATAGGTTG
GCGATCGCTG CTGTAGATAC TGCTACCCAT TTTACTGTTA AAAGTGGGAG TCGTTTTGCG
CAAGCTGAGT CTTTTATTCA ATCATGTTTA AACAATACAA TTTCTCTAGG TGCAACACAC
TTACCATATT CAGGTCCCCA CTTTTTTTGT AGCTTTACTT TCTTTGAAAA AGATACTCAT
GCCTATCTAC AAAACCTTTA TCAAAATGGT AATTACCAAC AAAAATTATC TCTAAACCTT
CACTTTCCTT TAGCAACAAT ATTTCTACCA TGCTGGCAAA TAACTCAGAC AAATAAACAT
AATATACTTG TAATTAATAC CGTTATTAAT AACTCTATTA ACATTAAAAA TCTTTCCCAT
AAAATTTGGC ATAAATTCCA GGAAATAACC CAGATAAAAC ATAATCATTT ATCAACTTTA
ACCAAGCCCA ATCAAAAACT TATAAAAATC AACGTCAATC ATTTACAAAA ATTTAAAAAA
TCAGTAGCTT CAGCTCTAGA ATTAATCAAT TCAAATTATT TAAGAAAAAT TGTTTTAGCC
CATGCTATAG ATATATATTC TCAAAATAAT TTCAACTTAA TCAAATCCTT AAACAACTTG
CGATTCATTT ATCCAGACTG CTATGTATTT TCTATTAGTA ATGGCAAGGG CCAAAACTTC
ATAGGTGCAA GTCCAGAACG CTTAATTAGT ATTAACAATA ATCAATTAGT TACAGATGCT
TTAGCAGGTT CTGCACCTAG AGGCAAAACC CCTAGTCAAG ATGCTAAATT AGCCAATAGT
TTATTATGTA GTGAAAAAGA TTTACGAGAA CATCAATTTG TCATAGATTT CATTATTAAA
CGTCTTCAAT ATTTAGGATT AAAACCAAAT TATTTACCCC AACCAAATCT ACTACAATTG
TCAAATATTC AGCATTTATG GACACCAATA AATGCAGAAG TTTCTCAAAA TATTCATTTA
TTAGAAATAT TAGCACAACT CCATCCCACA CCAGCAGTGG CAGGAGTTCC TAGAGATATT
GCTCAAGAAC AAATACAGAA TTTTGAAACT TTCGATCGCT CACTTTATGC AGCACCTATT
GGTTGGATAG ATCACCAAGG AAATGGAGAA TTTACTGTAG GTATTAGGTC AGCTTTAATT
GATGGAGAAC GCGCTAGACT TTATGCTGGT GCAGGTATAG TTACTGGTTC AAAACCAGAT
CAAGAGTTAG CAGAAGTTCA ACTCAAACTT CAGACATTAT TAAAAGCTTT AGTTTAA
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| Protein sequence | MPVTPTSVNL FQTYQDLYQF LFNCQQTLTD NMQTKIISIS REILSVDPLA VLQKICQPHQ
LHFYLEKQAI GEKNIHKNRL AIAAVDTATH FTVKSGSRFA QAESFIQSCL NNTISLGATH
LPYSGPHFFC SFTFFEKDTH AYLQNLYQNG NYQQKLSLNL HFPLATIFLP CWQITQTNKH
NILVINTVIN NSINIKNLSH KIWHKFQEIT QIKHNHLSTL TKPNQKLIKI NVNHLQKFKK
SVASALELIN SNYLRKIVLA HAIDIYSQNN FNLIKSLNNL RFIYPDCYVF SISNGKGQNF
IGASPERLIS INNNQLVTDA LAGSAPRGKT PSQDAKLANS LLCSEKDLRE HQFVIDFIIK
RLQYLGLKPN YLPQPNLLQL SNIQHLWTPI NAEVSQNIHL LEILAQLHPT PAVAGVPRDI
AQEQIQNFET FDRSLYAAPI GWIDHQGNGE FTVGIRSALI DGERARLYAG AGIVTGSKPD
QELAEVQLKL QTLLKALV
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