Gene Tery_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4054 
Symbol 
ID4242082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6261961 
End bp6262860 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content31% 
IMG OID638108958 
ProductAAA ATPase, central region 
Protein accessionYP_723539 
Protein GI113477478 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1222] ATP-dependent 26S proteasome regulatory subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0357172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTG AACTAGTCAA GGAGAAAAAC AAGTCTAATG CCAAAGATGA AGTTAGTAGT 
TTACTCGAAA CACCTAAATG GACGTTAGAT GAAATAGCTT TGTCAAAAAC TACAATTGAG
CAAATTAAAG AAATGATTGC TTATGTAAAA AATCGGGATA AATTGTTACT TGAATGGGAA
TTTAATCGTT TTCTCAAAAC AGGTAATGGT TTAAGCATCA ACTTTTTTGG ATTACCAGGT
ACAGGAAAAA GCATTACTGC TGAAGCCATT GCCAAAAAGT TAGAAACTCA GATCATCAAG
GTTAATTATG GAGAATTAGA ATCTGAATTA GTAGGTGGTA CATCTAAGAA TTTATCAAAG
GTTTTCAAGC TAGCTGAAGA AAATCAGAGC TTATTATTTT TTGATGAAGC TGATGCTGTA
TTAAGTAAAA GAATTTCCAA CTTATCCCAA GCAGCAGATC ATGGTGTTAA CTCTGCCAAA
AGCACCTTAT TAACATTGAT GGATAAGTTT AATGGCGTAA TTATATTTGC CACAAACTTA
TTTGAAAATT ATGATGAGGC TTTTTTAAGG AGAATTATTT TTAATGTTGA GTTTCCCGTA
CCAGATATAG AAATGAGAAC TCAACTTTGG CAATTTCATA TATCTGAAAA AGTGCCTAAA
AATATCAGTT ATGAAAGAGC GGCTGAAATT AGTGAAGGAT TATGTGGTGG AGATATTAGG
AACATCACAA TTAAGCTAGG ATTAAAATTG CTAGTTGGTA AAGTAAAAGT TATTGATGAA
GAAGTTATAA ATGAAGAAAT CGACAAATAT AAAACTATCA AACTGCGTCA CAAAAAAATT
AATTTAGCAG AAACAGTTGT TGTAGAAAAC GGAAATAATT CAAATTTAAA GGAGGAATAA
 
Protein sequence
MKFELVKEKN KSNAKDEVSS LLETPKWTLD EIALSKTTIE QIKEMIAYVK NRDKLLLEWE 
FNRFLKTGNG LSINFFGLPG TGKSITAEAI AKKLETQIIK VNYGELESEL VGGTSKNLSK
VFKLAEENQS LLFFDEADAV LSKRISNLSQ AADHGVNSAK STLLTLMDKF NGVIIFATNL
FENYDEAFLR RIIFNVEFPV PDIEMRTQLW QFHISEKVPK NISYERAAEI SEGLCGGDIR
NITIKLGLKL LVGKVKVIDE EVINEEIDKY KTIKLRHKKI NLAETVVVEN GNNSNLKEE