| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4034 |
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| Symbol | |
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| ID | 4242062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6237948 |
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| End bp | 6239858 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638108943 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_723524 |
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| Protein GI | 113477463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.172478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAATT TTAATCCACT GCTAATGGTT ATAAGAAAAG CAATAAATTT CCAAGTATTT
AGGAAAATTA TTAGTTTATC TACCCTAGAG TTAATAATAT TTTTAGGACT AATAAATATC
ATTTCTCCTA ATGCTATGTC ACAAAATTAT GAAGATAATA ATCAACTTCC ACAGGACTCC
AAGTCAAGGA AAAAATCTCT ATTTATTGCT TATCCTTCAC CCAATCATAA AACTACTTCT
GACAGAATTT TCTTAATTGG TACAGCTTCT CCAGAAGCTG AAGTTACTGT TAATGGAAAA
CTAATTAATG AGCGTAGTCG AATGGGTCAT TTTGCTCCTA CTTTTCCATT ACAAATAGGG
GAAAATATAT TTACTGTACA ACATCAAAAT GAAGAGATTA TTTTAAAAAT AACACGCAAT
TCAAATCAAC CACCTTTACC AGTAGGGGTA GCTTTTACTC AAGATTCTTT GACTCCGATA
AAAGATATTG CTAGAATGCC CGGGGAGTTG ATTTGTTTTC AGGCGATCGC TCCTCCAAAC
GCTAATATTT CTGTATTATT AGCTACCCAA ACTATTCCCC TATTTGCCCA ATCTCAAATA
GTAAATTTAC CAGGAAATTT AGCAGTATTA ACAGGAGATA ATCAACCTTT TCCCTCTGGG
GGAGACTATT ATCAAGGTTG TACAAAAGTA GAAACACCAG GAGAGTTAGG TCAACCTGAG
TTTCAACTTA GTCTCATGGG GAAAACAGTG ACTCAAAAAG CACCGGGAAA AGTGAGTATT
CTTTCTCCAA CTACGTTTGA AATAGCTGAG GTGACAGTAG AAGAGGGAGT TGCCAGAACC
GGACCCAGTA CCACCTATTC ACGCTTGACA CCATTACCAA AAGGTACTAA AGCTTTAATT
ACAGGGAAAG AGGGAGATTA TTTACGCCTT GACTATGGTG GGTGGATCAA AGCAAACGAG
ACCAGGATAT TTACAGATGC AACACCACCG CGTTCGGTGA TTCGGAGTGC GATCGCTCGT
CAGGTTCAAG GTGCAACGGA AATTAGGTTT CCTCTGCAAG TTCCGGTGCC AGTAACAGTT
GAACAGGGCG CTCGCTATTT AAGTTTAACT TTGCATAATA CTACTGCTCA AACTGATACT
ATTCGCCTAG ATGATGATCC CTTAATTGAG AGATTAGACT GGCAACCAGT TTTGACTTCA
ACAGTACAAA ATGAACAGGC AGTTAGATAT AAGTTTAACT TAAAAACAGA CCAACAATGG
GGTTATAAAT TACAATATGT TGGTACAACT TTACTATTAA CTTTGCGACA TCCTCCAGCG
GTAAAAAGTG TTATTAGTTC TGCTACTCAA CCTTTAACTG GAATGAAAAT TTTAATTGAT
GCAGGACATG GTAGTGAGAA TGATCTAGGG GCAATAGGTC CGACTGGTTA TCCTGAAAAA
AATGTGACAT TAATTATATC AAAGCTATTA CAAAATGAGT TAATTAATCG AGGAGCTTTA
GTGTATATGA CACGAAAGGC AGAGGAAGAT TTATACCCTA AAGACCGTGT AGAAATGATT
AATCAACAAG TTCCAGATTT AGCACTTTCT GTTCATTATA ATGCTTTACC TGATTATGGA
GATGCCCTAA AAACTCAGGG AATTGGTACT TTTTGGTATC ATTCTCAAGC TCATAGTTTG
GCAATATTTT TACATAATTA TTTAGTGGAA AAATTAGACC GACCTTCCTA TGGAGTATTT
TGGAATAATT TGGCTTTAAC TCGTCCCGCG ATCGCTCCTT CTGTGTTGTT AGAATTAGGA
TTTATGATTA ACCCTTATGA ATTTGAATGG ATTATGAATT CTCAAGAACA ACAGAAATTA
GCAAAAGCAT TAGCAGATGG AATTGTGGAG TGGGTCAAAA AAAGTCAGTA A
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| Protein sequence | MGNFNPLLMV IRKAINFQVF RKIISLSTLE LIIFLGLINI ISPNAMSQNY EDNNQLPQDS
KSRKKSLFIA YPSPNHKTTS DRIFLIGTAS PEAEVTVNGK LINERSRMGH FAPTFPLQIG
ENIFTVQHQN EEIILKITRN SNQPPLPVGV AFTQDSLTPI KDIARMPGEL ICFQAIAPPN
ANISVLLATQ TIPLFAQSQI VNLPGNLAVL TGDNQPFPSG GDYYQGCTKV ETPGELGQPE
FQLSLMGKTV TQKAPGKVSI LSPTTFEIAE VTVEEGVART GPSTTYSRLT PLPKGTKALI
TGKEGDYLRL DYGGWIKANE TRIFTDATPP RSVIRSAIAR QVQGATEIRF PLQVPVPVTV
EQGARYLSLT LHNTTAQTDT IRLDDDPLIE RLDWQPVLTS TVQNEQAVRY KFNLKTDQQW
GYKLQYVGTT LLLTLRHPPA VKSVISSATQ PLTGMKILID AGHGSENDLG AIGPTGYPEK
NVTLIISKLL QNELINRGAL VYMTRKAEED LYPKDRVEMI NQQVPDLALS VHYNALPDYG
DALKTQGIGT FWYHSQAHSL AIFLHNYLVE KLDRPSYGVF WNNLALTRPA IAPSVLLELG
FMINPYEFEW IMNSQEQQKL AKALADGIVE WVKKSQ
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