Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4032 |
Symbol | |
ID | 4242060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6234655 |
End bp | 6236352 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638108942 |
Product | TrkA-N |
Protein accession | YP_723523 |
Protein GI | 113477462 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.341469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTA GAATCATAGT TTGTGGCCTG GGTCGTACCG GTTACAAAAT ATTCCGTCTA TTAAGACAGC AGGGTGCAAC AGTTGTTGGC ATAAGTGAGC GCCCACTCCG TGGAGAGGGT TCAGAAATTA TCATCGGCAA CTTTCGATCA GCATCTACTT TATTAGCAGC AGGTATTCAA AGTGCTCATA CTCTGATTTT AACAGGGAAA GATGAATCTG TTAATTTGGG AGTTTTAATG TTAGCAAGGA TTTTGAATCC TAAAATTCGG ATTATTAATC GCTTGTTTAA CACAAGTTTG GGCGATCGCT TAGATCATAC TTTGACTGAC CACACAAGCA TGAGTGTGTC AGCTTTAGCA GCCCCAGTGT TTGCTTTTGC AGCACTAGGA AATCATGCTA TTGGTCAGCT ACAGATGTAC AACCAGACCT GGCCTATGTA CGAAGAATTA ATCGATCATA ATCATCCTTG GGTAGATCGT AAGCTAACTT CGCTTTGGGA TGATCGTGAT TTGATGTTAA TTTACTACAT ACCAGTAGGA GATCCAATCG ATCTAATCTC TGCAGTAGTA CAAGAGCGAG AGTTAAAAGT AGGCGATCGA GTAATTATTG CTAGCAAACC TAGTATCCGA AATCGCAGAC AAAATTTAAT TCACAGCTTA TTCAGAATAT TTGGTAGACT TAGACAATTT CAGCGACATA GTAAATCTGC AGTCATCCTT AACTTAGCTC TTTTAGTAAC AGTTTTAGTT TGTACTATTA CTTATATTAG TATTAACCTG AATAATAGTT TCGTTGATTC TCTGTACTTT ACTGTTGGTA TGATTACAGG AGCAGGGGGA AATGAAAAAA TAGCAGAACA AGCACCAGGT AGTATCAAAA TATTTACCTC AATAATGATG CTTGTAGGTA CAGCGATCGT CGGTATTTGC TATGCACTTC TAAATGACTT TGTATTGGGT ACTCGCTTGC AAGAATATTG GGATGCTGCC CGCATTCCTG TACGCAATCA TTATATTATC TGTGGGTTTG GTGGCATTGG TTTACATATT GCTAAGCAAC TTATTGCTAG TGGTTATGAA GTAGTAATAA TAGAACCCGA TCCTAAGTGT CGATTTCTCA ATATTGCCAG ATCAATGAAA ATTACTGTGA TTGAGGGAGA TGCAAGTTTA TCTTCGACTT TAGAGGTTGC CAATATTGAA AAAGCCGAAG CTCTATTAGC TGTAACTGGT AATGATATTA TTAACTTGAA AATTGCTTTG AGTGCCAAAG GTCTGATGCC GAAAGTATCA GTTGTAGTGA GAAATCAAGA TCCGCATTTA GCCCTCATGG TACAACAAGT CTTTGAATTT GAATCTGTAC TTAGTCCCAC AGAATTAGCA GCTCCTGCTT TTGCTGCAGC AGCTATTGGT GGTAGAATTC TTGGCAATGG AATTACTGCA GATAGTTTGT GGGTAGCATT AGCCACTTTA ATTACACCGG GACATCCTTT TTGTGGTAAA CTTACTAAAA ATGTGGCTCA TAGTGCTGAC TTTGTACCTT TGTATATAGA AAGCAACGGA AAAGAAATTC ATGGTTGGGA TTTGTTATCT GCGACTCTGA ACTCAGGTGA TGTTTTGTAC TTAACGATGC CAGCTAATAG ACTAGACAAA CTGTGGAGAA ATGCGAGTAT ACAATTAACG AGTAATGTAG TTGAATAA
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Protein sequence | MKPRIIVCGL GRTGYKIFRL LRQQGATVVG ISERPLRGEG SEIIIGNFRS ASTLLAAGIQ SAHTLILTGK DESVNLGVLM LARILNPKIR IINRLFNTSL GDRLDHTLTD HTSMSVSALA APVFAFAALG NHAIGQLQMY NQTWPMYEEL IDHNHPWVDR KLTSLWDDRD LMLIYYIPVG DPIDLISAVV QERELKVGDR VIIASKPSIR NRRQNLIHSL FRIFGRLRQF QRHSKSAVIL NLALLVTVLV CTITYISINL NNSFVDSLYF TVGMITGAGG NEKIAEQAPG SIKIFTSIMM LVGTAIVGIC YALLNDFVLG TRLQEYWDAA RIPVRNHYII CGFGGIGLHI AKQLIASGYE VVIIEPDPKC RFLNIARSMK ITVIEGDASL SSTLEVANIE KAEALLAVTG NDIINLKIAL SAKGLMPKVS VVVRNQDPHL ALMVQQVFEF ESVLSPTELA APAFAAAAIG GRILGNGITA DSLWVALATL ITPGHPFCGK LTKNVAHSAD FVPLYIESNG KEIHGWDLLS ATLNSGDVLY LTMPANRLDK LWRNASIQLT SNVVE
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