Gene Tery_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4001 
Symbol 
ID4244568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6189732 
End bp6190838 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content33% 
IMG OID638108916 
Producthypothetical protein 
Protein accessionYP_723497 
Protein GI113477436 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.591053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTG AACAAAGGAT TTCTATTTCT ATCTCTAACC TACTGTTAAT TATTAGTAGT 
TTTTTACTAT TAATTATTTT ATGGCAAGTG CGAAGTCTGA TAGTACTGTT GATGATTGCA
GTAATTTTAG CAGCATCAAT TTCACCATTA GTAAATTTAA CAGAAAGAAT TAGATTGCCT
CGTTGGTTAG GGGTAGTTAT TGTCTATTTA ACTCTAATTT CTGGATTGAT CAGTGTAGTC
TTAATTATTG GCCCACAAGT TTTTGAGCAA ATTGAAAGGC TTTTACGACA ATTGCCATTA
TTTTCTAAGA GTATCAGCGA TAATTTTGAA AATTTTGTTA GTTCTTTAAC TCAAAATCCC
CCTGATTGGA TTAATCAACT TTTTGATACT AAATCTGTCA CAAGTTGGGT AATTAGTTCT
AGTCAACAAC TTTTATTACG TTCCTATAGT TTAACTAAAG GTGTATTGGG AAGCATAGTT
AGTTTAATAT TGGCTTTATT TATTTCAGGC TATATGGTAT CTGATAGTCA AACTTTAATT
ACCAGTATAG TCAAACTTTT TCCTCAACCT TGGGATAAAC GTCTGGAAGA TCAAGTTATT
CCTGTAACTA AAAGAATGGG AGGTTACATT AGAGGTAGAA TTATTGTTTC TGCTATTTTA
GGTCTAGCAA CAACTACTGG TTTAGGATTT TTAGGATTGC AAGATTTTTC CCTAGGCTTA
GGAGCAATAG CTGCTGTGAC AAACCTGATT CCTTTTATCG GCCCAATTCT TGGTGCAGTT
CCAGCCTTAA TTGTTGCTAT TGCTAAAGGG GGATGGTTGT TTTTATGGGT AATAATTTTG
TACTATATTA TCCAAAATAT AGAGACTTAT ATACTCGATC CTTTACTGGT AGGTTCTTCT
GTTGGAGTAC ATCCTTTATA TCAATTATTA TCGGTTCTAG TAGGAGTTCA GTTATTAGGA
ATTATTGGTG CTTTGATTAT TCCACCTTGG TTTGCTGGCG CTGCTGCTCT AGTAGAAAAT
TTATATTTGA AACCCAAGTT AGAAGCCGAA AATATCCAAT CTATTATTAC CAGTAATGGC
GAGCATAATT TACCCCCTGT AATATAA
 
Protein sequence
MKPEQRISIS ISNLLLIISS FLLLIILWQV RSLIVLLMIA VILAASISPL VNLTERIRLP 
RWLGVVIVYL TLISGLISVV LIIGPQVFEQ IERLLRQLPL FSKSISDNFE NFVSSLTQNP
PDWINQLFDT KSVTSWVISS SQQLLLRSYS LTKGVLGSIV SLILALFISG YMVSDSQTLI
TSIVKLFPQP WDKRLEDQVI PVTKRMGGYI RGRIIVSAIL GLATTTGLGF LGLQDFSLGL
GAIAAVTNLI PFIGPILGAV PALIVAIAKG GWLFLWVIIL YYIIQNIETY ILDPLLVGSS
VGVHPLYQLL SVLVGVQLLG IIGALIIPPW FAGAAALVEN LYLKPKLEAE NIQSIITSNG
EHNLPPVI