| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3998 |
|---|
| Symbol | |
|---|
| ID | 4244565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6187365 |
|---|
| End bp | 6187895 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638108913 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_723494 |
|---|
| Protein GI | 113477433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.526656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.806662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCAA CTACAGAGTT ACTCATAGCT TCTCAATGGT TTGGTATTGC TACAATTGGA
TTTTTTATTT TGACAATTAT TGCCTTTATT TTTAATAGGG AGTTTAGATT TAGATTAGTG
GGAGTAACAG GTTTTATGGG AGTCCTAACT GCTGGTTTAT TTGGTTTAAG TTTAGGACTA
TTCAACCGGG TAGAAGTTCC AGGAGCAGTT AGATATACGT TAGTTTATGA TAATGGTGCA
ACTCAAACAG TAATTGCTGT TGCTCCTACT ATTAAAGAGT CAGAGTTAGT AGCAACTATG
GAGCAGGCAG CAGGAGATTT ATTTTCACCG GGCCGTTTGG GTATGGATCG TCAATTAACT
ATTAGAGTTA GAACTATTAT TCATCCAGAA GAGGGTGTTT CTGAGCCTCT TTATTTGGGG
GAAGTTAAAC GTTCTTTGTC TCAACGGGAA GATGAAAATA TAGATGTTAA AATATTTCCT
GAAACTGTGG CAAAGTTATT AGATTATCAG ATTGATAATC TAGAGAGTTA A
|
|---|
| Protein sequence | MLSTTELLIA SQWFGIATIG FFILTIIAFI FNREFRFRLV GVTGFMGVLT AGLFGLSLGL
FNRVEVPGAV RYTLVYDNGA TQTVIAVAPT IKESELVATM EQAAGDLFSP GRLGMDRQLT
IRVRTIIHPE EGVSEPLYLG EVKRSLSQRE DENIDVKIFP ETVAKLLDYQ IDNLES
|
|---|
| |