| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3996 |
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| Symbol | |
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| ID | 4244563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6180637 |
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| End bp | 6185721 |
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| Gene Length | 5085 bp |
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| Protein Length | 1694 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638108911 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_723492 |
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| Protein GI | 113477431 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.271204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.601264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGAG AAAGAATTAT TTGGCAAGAG GATTTTTCGT TAACATTTAC AGAGGAATAT
GAAGCTTTAG TAGAGACTAT TAGATTTAAT GAGGGTTTTA GTTTATTGTT TGCGGAATGT
TCTCGAGCAA AGGGAACAGA AATTATGGAG AAAATTCGCC TGGATATTCC GGAGCAAAGA
GCAGATGTTT TGGGTTTAGA TAAGACTATT TATCATTTTT ATAATCGAGT CAAAGAATTA
CCAAATCTGA AAGAAATTGA TATTTTGTTT GTGACTGGTT TGGAATATTC TTTCTATCAA
TATGAGGATG AAATGAAGGA AAGAGGTTGG GATCATAATG AGATTATTTC TATTAGCAGA
AGAGGTGTTC CTCCGGTTTT GATTAATTTG AATCAGCAGC GAGAAAGATT TAGGGATGAT
TTTGATATTT GCTTTGTATT TCTGTTGCCA AGGTTTGCTA TAAATTATCT GATTAAACGT
GCGCCAGATT TTTTTGATTG GCGTTCTGGG CTGTTTCGGT TTCCTATGGA TCAGGAAAGT
TTTGATAAGG GATATTTGGA AGTCCGTGAA AAGAAATTAG AGGATTATAT AGAGTTTACT
AAGCCAGAGT GTAAAGTTGA ATTGGTGAGC ATTAAAAGTT TACTTGATGA AGATTTGCTT
CCTGTAGGAC AAAAAGCAGA TTTGTTAGTT AGAAAGGCTT CTCTAGATAG AAAGTTGCAG
CAAAATGAAG AGGCAATATT AACTTGTGAT GAAGCTTTAA AAATAGAACC AAATGATTAC
AATGCTTGGA ACAATAAAGG CAGTGCACTA ATAAATTTAG AAAGATATGA AGAGGCTGTT
GCTGCTTATG AAAAAGCTTT AGAAATTAAA CCTGACTTTC ACGAAGCTTG GTTTTTGAAA
GGCATAGCTC TGATAAATTT AGAAAGATAT GAAGAGGCTG TTGCTGCTTA TGAAAAAGCT
TTAGAAATTA AACCTGACTT TCACGAAGCT TGGTTTTTGA AAGGCATAGC TCTGATAAAT
TTAGAAAGAT ATGAAGAGGC TGTTGCTGCT TATGAAAAAG CTTTAGAAAT TAAACCTGAC
TTTCACGAAG CTTGGTTTTT GAAAGGCAAT GCTCTGGGAA ATTTAGAAAG ATATGAAGAG
GCTGTTGCTG CTTATGAAAA AGCTTTAGAA ATTAAACCTG ACTTTCACGA AGCTTGGTTT
TTGAAAGGCA TAGCTCTGGG AAATTTAGAA AGATATGAAG AGGCTGTTGC TGCTTATGAA
AAAGCTTTAG AAATTAAACC TGACTTTCAC GAAGCTTGGT TTTTGAAAGG CAATGCTCTG
GGAAATTTAG AAAGATATGA AGAGGCTGTT GCTGCTTATG AAAAAGCTTT AGAAATTAAA
CCTGACTTTC ACGAAGCTTG GTTTTTGAAA GGCAATGCTC TGGGAAATTT AGAAAGATAT
GAAGAGGCTG TTGCTGCTTA TGAAAAAGCT TTAGAAATTA AACCTGACTT TCACGATGCT
TGGTTTTTGA AAGGCAATGC TCTGGGAAAT TTAGAAAGAT ATGAAGAGGC TGTTGCTGCT
TATGAAAAAG CTTTAGAAAT TAAACCTGAC TTTCACGATG CTTGGTTTTT GAAAGGCAAT
GCTCTGGGAA ATTTAGAAAG ATATGAAGAG GCTGTTGCTG CTTATGAAAA AGCTTTAGAA
ATTAAACCTG ACTTTCACGA AGCTTGGTTT TTGAAAGGCA ATGCTCTGGG AAATTTAGAA
AGATATGAAG AGGCTGTTGC TGCTTATGAA AAAGCTTTAG AAATTAAACC TGACTTTCAC
GAAGCTTGGT TTTTGAAAGG CAATGCTCTG GGAAATTTAG AAAGATATGA AGAGGCTGTT
GCTGCTTATG AAAAAGCTTT AGAAATTAAA CCTGACTTTC ACGATGCTTG GTTTTTGAAA
GGCAATGCTC TGGGAAATTT AGAAAGATAT GAAGAGGCTG TTGCTGCTTA TGAAAAAGCT
TTAGAAATTA AACCTGACTT TCACTATGCT TGGTTTTTAA AAGGCAATGC TCTGGGAAAT
TTAGAAAGAT ATGAAGAAGC TGTTGCTGCT TTTGAAAAAG CTTTAGAAAT TAAACCTGAC
TTTCACGAAG CTTGGAACAA TAAAGGCATA GCTCTGGAAA AATTAGAAAG ATATGAAGAA
GCTGTTGCTG CTTTTGAAAA AGCTTTAGAA ATTAAACCTG ACTTTCACGA AGCTTGGAAC
AATAAAGGCA TAGCTCTGGA AAAATTAGAA AGATATGAAG AAGCTGTTGC TGCTTTTGAA
AAAGCTTTAG AAATTAAACC TGACTTTCAC GAAGCTTGGA ACAATAAAGG CATAGCTCTG
GAAAAATTAG AAAGATATGA AGAAGCTGTT GCTGCTTTTG AAAAAGCTTT AGAAATTAAA
CCTGACTTTC ACGAAGCTTG GAACAATAAA GGCATAGCTC TGGAAAAATT AGAAAGATAT
GAAGAGGCTG TTGCTGCTTT TGAAAAAGCT TTAGAAATTA AACCTGACTT TCACGATGCT
TGGTTTTTGA AAGGCAATGC TCTGGGAAAT TTAGAAAGAT ATGAAGAGGC TGTTGCTGCT
TATGAAAAAG CTTTAGAAAT TAAACCTGAC TTTCACGAAG CTTGGCACAA TAAAGGCATA
GCTCTGGAAA ATTTAGAAAG ATATGAAGAG GCTGTTGCTG CTTATGAAAA AGCTTTAGAA
ATTAAACCTG ACTTTCACGA AGCTTGGAAC AATAAAGGCA TAGCTCTGGA AAAATTAGAA
AGATATGAAG AGGCTGTTGC TGCTTTTGAA AAAGCTTTAG AAATTAAACC TGACTTTCAC
GAAGCTTGGC ACAATAAAGG CAATGCTCTG GGAAATTTAG AAAGATATGA AGAGGCTGTT
GCTGCTTATG AAAAAGCTTT AGAAATTAAA CCTGACTTTC ACTATGCTTG GTTTTTAAAA
GGCATAGCTC TGGGAAAATT AGAAAGATAT GAAGAGGCTG TTGCTGCTTA TGAAAAAGCT
TTAGAAATTA AACCTGACTT TCACGAAGCT TGGTTTTTAA AAGGCATAGC TCTGGGAAAA
TTAGAAAGAT ATGAAGAGGC TGTTGCTGCT TATGAAAAAG CTTTAGAAAT TAAACCTGAC
TTTCACGAAG CTTGGCACAA TAAAGGCATA GCTCTGGAAA ATTTAGAAAG ATATGAAGAG
GCTGTTGCTG CTTATGAAAA AGCTTTAGAA ATTAAACCTG ACTTTCACGA AGCTTGGCAC
AATAAAGGCA TAGCTCTGGA AAATTTAGAA AGATATGAAG AAGCTGTTGC TGCTTATGAA
AAAGCTTTAG AAATTAAACC TGACTATCAC TATGCTTGGC ACAATAAAGG AGATGCTCTG
GAAAATTTAG AAAGATATGA AGAGGCTGTT GCTGCTTATG AAAAAGCTTT AGAAATTAAA
CCAGACTATC ACTATGCTTG GAATGGTAAA GGTATAGCTC TGATAAAATT AGAAAGATAT
GAAGAAGCTG TTGCTGCTTT TGAAAAAGCT TTAGAAATTA AACCTGACTT TCACGATGCT
TGGTTTTTGA AAGGCAATGC TCTGGGAAAT TTAGAAAGAT ATGAAGAAGC TGTTGCTGCT
TTTGAAAAAG CTTTAGAAAT TAAACCTGAC TTTCACGAAG CTTGGAACAA TAAAGGCATA
GCTCTGGAAA AATTAGAAAG ATATGAAGAG GCTGTTGCTG CTTTTGAAAA AGCTTTAGAA
ATTAAACCTG ACTTTCACGA AGCTTGGCAC AATAAAGGCA ATGCTCTGAT AAAATTAGAA
AGATATGAAG AGGCTGTTGC TGCTTATGAA AAAGCTTTAG AAATTAAACC TGACTTTCAC
GATGCTTGGT TTTTGAAAGG CAATGCTCTG ATAAAATTAG AAAGATATGA AGAGGCTGTT
GCTGCTTATG AAAAAGCTTT AGAAATTAAA CCTGACTTTC ACGAAGCTTG GTTTTTGAAA
GGCAATGCTC TGATAAAATT AGAAAGATAT GAAGAGGCTG TTGCTGCTTA TGAAAAAGCT
TTAGAAATTA AACCTGACTT TCACGAAGCT TGGTTTTTGA AAGGCAATGC TCTGATAAAA
TTAGAAAGAT ATGAAGAGGC TGTTGCTGCT TATGAAAAAG CTTTAGAAAT TAAACCAGAC
TTTCACGAAG CTTGGTTTTT GAAAGGCAAT GCTCTGGGAA ATTTAGAAAG ATATGAAGAG
GCTGTTGCTG CTTATGAAAA AGCTTTAGAA ATTAAACCTG ACTTTCACGA AGCTTGGCAC
AATAAAGGCA TAGCTCTGGG AAAATTAGAA AGATATGAAG AAGCTGTTGC TGCTTTTGAA
AAAGCTTTAG AAATTAAACC TGACTTTCAC GAAGCTTGGC ACAATAAAGG CAATGCTCTG
ATAAAATTAG AAAGATATGA AGAGGCTGTT GCTGCTTATG AAAAAGCTTT AGAAATTAAA
CCTGACTTTC ACGAAGCTTG GTTTTTGAAA GGCAATGCTC TGATAAAATT AGAAAGATAT
GAAGAGGCTG TTGCTGCTTA TGAAAAAGCT TTAGAAATTA AACCTGACTT TCACGAAGCT
TGGTTTTTGA AAGGCAATGC TCTGATAAAA TTAGAAAGAT ATGAAGAGGC TGTTGCTGCT
TATGAAAAAG CTTTAGAAAT TAAACCTGAC TTTCACGAAG CTTGGTTTTT GAAAGGCAAT
GCTCTGATAA AATTAGAAAG ATATGAAGAG GCTGTTGCTG CTTATGAAAA AGCTTTAGAA
ATTAAACCAG ACGATGAATA TTCTATTATT AATCTTGGTT TAGTTAAATA TGAAATGGGT
TTTATAGATC AAGCAATAGA AAATTGGCAA GCCGCAACTG AAATTAATAA CCAACTCGTA
GAACCTAAAT TAGCAATAGG AGTTGCCCTC TATAAAAAAG GTAAAATTCC AGAAAGTTTA
GCAACAACTG AAGCCGCCCT AAAATCAGAT AAAAGTTGGG GTTCCTCGAA GCGCCTGAAA
AAAGAACTTT GGGGGGATAA ACTAATAGCA GATGCAGCCA AATTATTAGA AAATCCTCAG
ATAAAAGCCT TACTATCTCA GACAAAAAAC TCAGTATTAA CTTAA
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| Protein sequence | MKGERIIWQE DFSLTFTEEY EALVETIRFN EGFSLLFAEC SRAKGTEIME KIRLDIPEQR
ADVLGLDKTI YHFYNRVKEL PNLKEIDILF VTGLEYSFYQ YEDEMKERGW DHNEIISISR
RGVPPVLINL NQQRERFRDD FDICFVFLLP RFAINYLIKR APDFFDWRSG LFRFPMDQES
FDKGYLEVRE KKLEDYIEFT KPECKVELVS IKSLLDEDLL PVGQKADLLV RKASLDRKLQ
QNEEAILTCD EALKIEPNDY NAWNNKGSAL INLERYEEAV AAYEKALEIK PDFHEAWFLK
GIALINLERY EEAVAAYEKA LEIKPDFHEA WFLKGIALIN LERYEEAVAA YEKALEIKPD
FHEAWFLKGN ALGNLERYEE AVAAYEKALE IKPDFHEAWF LKGIALGNLE RYEEAVAAYE
KALEIKPDFH EAWFLKGNAL GNLERYEEAV AAYEKALEIK PDFHEAWFLK GNALGNLERY
EEAVAAYEKA LEIKPDFHDA WFLKGNALGN LERYEEAVAA YEKALEIKPD FHDAWFLKGN
ALGNLERYEE AVAAYEKALE IKPDFHEAWF LKGNALGNLE RYEEAVAAYE KALEIKPDFH
EAWFLKGNAL GNLERYEEAV AAYEKALEIK PDFHDAWFLK GNALGNLERY EEAVAAYEKA
LEIKPDFHYA WFLKGNALGN LERYEEAVAA FEKALEIKPD FHEAWNNKGI ALEKLERYEE
AVAAFEKALE IKPDFHEAWN NKGIALEKLE RYEEAVAAFE KALEIKPDFH EAWNNKGIAL
EKLERYEEAV AAFEKALEIK PDFHEAWNNK GIALEKLERY EEAVAAFEKA LEIKPDFHDA
WFLKGNALGN LERYEEAVAA YEKALEIKPD FHEAWHNKGI ALENLERYEE AVAAYEKALE
IKPDFHEAWN NKGIALEKLE RYEEAVAAFE KALEIKPDFH EAWHNKGNAL GNLERYEEAV
AAYEKALEIK PDFHYAWFLK GIALGKLERY EEAVAAYEKA LEIKPDFHEA WFLKGIALGK
LERYEEAVAA YEKALEIKPD FHEAWHNKGI ALENLERYEE AVAAYEKALE IKPDFHEAWH
NKGIALENLE RYEEAVAAYE KALEIKPDYH YAWHNKGDAL ENLERYEEAV AAYEKALEIK
PDYHYAWNGK GIALIKLERY EEAVAAFEKA LEIKPDFHDA WFLKGNALGN LERYEEAVAA
FEKALEIKPD FHEAWNNKGI ALEKLERYEE AVAAFEKALE IKPDFHEAWH NKGNALIKLE
RYEEAVAAYE KALEIKPDFH DAWFLKGNAL IKLERYEEAV AAYEKALEIK PDFHEAWFLK
GNALIKLERY EEAVAAYEKA LEIKPDFHEA WFLKGNALIK LERYEEAVAA YEKALEIKPD
FHEAWFLKGN ALGNLERYEE AVAAYEKALE IKPDFHEAWH NKGIALGKLE RYEEAVAAFE
KALEIKPDFH EAWHNKGNAL IKLERYEEAV AAYEKALEIK PDFHEAWFLK GNALIKLERY
EEAVAAYEKA LEIKPDFHEA WFLKGNALIK LERYEEAVAA YEKALEIKPD FHEAWFLKGN
ALIKLERYEE AVAAYEKALE IKPDDEYSII NLGLVKYEMG FIDQAIENWQ AATEINNQLV
EPKLAIGVAL YKKGKIPESL ATTEAALKSD KSWGSSKRLK KELWGDKLIA DAAKLLENPQ
IKALLSQTKN SVLT
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