| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3994 |
|---|
| Symbol | |
|---|
| ID | 4244561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6175036 |
|---|
| End bp | 6175836 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638108909 |
|---|
| Product | peptidoglycan binding domain-containing protein |
|---|
| Protein accession | YP_723490 |
|---|
| Protein GI | 113477429 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.552337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.329638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCT TACCTACTAT TACTACTCTA TTAAGTTTAG TTACGCTGTT TAGCTTGACT
TCCAACAGGG CAATTGCGTC TGATAAAACA GAATCTGTGA CAGCAGAAAA AGAAGAAAGC
TTAACACCCC AATTAAACTC CGATAATTCT ATCTTTAGTC AACCAGATAA AATCAAAAGT
AAGCAGGAAC AAAAACAGAA AAATAAAAGT TTTCTGATAC CTTTTACTCC AAGAAATTCT
AGGTTTTTTA CTAAACCTGC TCAACCTGAA CTATTCTCTA AACCTTATTA TTCGGGCTCT
CCCCAAAAAC GAGAAAATCA AAAGAAAATA TCACAGGGTT CGCGAGGTGC AGAAGTCTGG
GCAGTACAGA GACGTTTGCA AGCTAGAGGT TTTAACCCTG GTGCTGTAGA TAGTATATTT
GGTGCTCGTA CCACAAAAGC AGTAAAAGCT TTTCAAGAGT CTGTGGGTTT AACTGTCACA
GGTATAGTTG ATGAACTTAC CTGGACCTCC CTAGCTAAAC CCTCATTTTC TTCTCGTCCA
CCTATTCAAA TAGCAAAAAT ACCAACCCTA AAGCAAAAAC AAGTAGTCAA AGTAGAGAAG
ATATTAGCCA AAGGAGACAG AGGCTCCAAA GTCAAAACCT TACAAATTGG TCTAGGAACA
ATGGGGTTTA ATCCTGGTCC AATTGATGGA ATATTTGGTA GCAAAACTAC GGGAGCAGTG
AAAGAATTTC AAAAATCTAA AGGAATTAAA GCTGATGGGA TAGTTGATCA AAAAACTTGG
AAAGCTTTCA ATCAGAAGTA A
|
|---|
| Protein sequence | MMRLPTITTL LSLVTLFSLT SNRAIASDKT ESVTAEKEES LTPQLNSDNS IFSQPDKIKS
KQEQKQKNKS FLIPFTPRNS RFFTKPAQPE LFSKPYYSGS PQKRENQKKI SQGSRGAEVW
AVQRRLQARG FNPGAVDSIF GARTTKAVKA FQESVGLTVT GIVDELTWTS LAKPSFSSRP
PIQIAKIPTL KQKQVVKVEK ILAKGDRGSK VKTLQIGLGT MGFNPGPIDG IFGSKTTGAV
KEFQKSKGIK ADGIVDQKTW KAFNQK
|
|---|
| |