| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3954 |
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| Symbol | |
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| ID | 4244037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6113981 |
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| End bp | 6115432 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108872 |
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| Product | zeta-carotene desaturase |
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| Protein accession | YP_723454 |
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| Protein GI | 113477393 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02732] carotene 7,8-desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.134571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.596487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTTG CGATCGCAGG TGCAGGATTA GCAGGAATGG CCACAGCAGT TGAATTGGCT
GATGCTGGAC ATCAAGTGGA AATATTTGAA TCTCGCCCCT TTGTTGGAGG TAAAGTAGGT
AGTTGGGTAG ATAAGAATGG AAACCATGTA GAAATGGGTT TGCACGTTTT CTTTGGCTGT
TACTATCAAC TTTTTGAGTT AATGAAAAAA GTAGGGGCCT TTAAAAACCT CCGCCTCAAA
GAACATAGTC ATAATTTTAT TAATAAAGGG GGCAAAACAG GTGCTCTAGA TTTTCGCTTC
CTCACGGGAG CGCCTTTTAA TGGATTAAAA GCTTTTTTTA CCACATCCCA GCTGTCTGCG
CAAGACAAAC TACAAAATGC AATAGCCCTC GGCACCAGTC CTATAGTCAG AGGGTTGATA
GATTTTGATG GGGCAATGAA AACTATCCGA GATTTGGATA AAGTTAGTTT TGGAGAGTGG
TTCCGTCGCC AAGGTGGGAG TAATGGAAGT ATCAAAAGAA TGTGGAACCC TATTGCTTAT
GCTTTGGGTT TCATTGATGC AGATAATATT TCTGCCCGAT GTATGTTGAC AATATTCCAG
TTTTTTGCTG CTAAAACAGA AGCATCTGTA TTGCGGATGT TGAATGGTTC TCCTTATGAA
TATCTCCACA AACCTATTGT TGATTATTTG GAGGCACGGG GCACTAAAAT CTATACTAGA
AAAAAAGTTA GGCAAATACA ATTTTTAGAG AATGATGGAG AAACTCGTGT TAGTGGAATA
GTTATAGCTA ATGGGGATAC TGAAGTTACT ATTACTGCTG ATGCTTATGT TTTTGCCTGC
GATGTACCAG GTATTCAGCG TATTCTACCT GAAGCTTGGC GAAAATGGCC AGAGTTTGAC
AATATCTATA AATTAGATGC AGTACCAGTT GCTACAGTAC AGTTAAGATT TGATGGTTGG
GTAACCGAAC TACATAATAA AAACCAACGT CAACAATTAG ATCATGCTGC TGGTATTGAT
AATTTACTTT ATACTCCAGA TGCTGATTTT TCCTGTTTTG CTGATTTGGC ATTAACAAGT
CCAGAAGATT ATTATCGGCA AGGAGAAGGT TCTTTATTAC AGTTGGTATT AACACCAGGA
GATCCTTTTA TTAAAGAAAA TAATGAGGCG ATCGCTCACC ATGTTTTAAA ACAAGTCCAT
GAATTATTTC CTTCATCACG GGAGTTAAAT ATGACTTGGT ATAGTGTGGT GAAATTAGCT
CAGTCTTTAT ATCGGGAAGC TCCAGGTATG GATCCATATC GTCCGAACCA AAAAACACCA
GTGCCTAACT TTTTTCTGGC AGGTAGCTAT ACTCAACAAG ATTATATTGA TAGTATGGAG
GGGGCAACTA TTTCTGGGAA ACAAGCTGCT CAGATAATTT TGACAAATGT GGAAAAGATT
TTGGGGCAAT AG
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| Protein sequence | MRVAIAGAGL AGMATAVELA DAGHQVEIFE SRPFVGGKVG SWVDKNGNHV EMGLHVFFGC
YYQLFELMKK VGAFKNLRLK EHSHNFINKG GKTGALDFRF LTGAPFNGLK AFFTTSQLSA
QDKLQNAIAL GTSPIVRGLI DFDGAMKTIR DLDKVSFGEW FRRQGGSNGS IKRMWNPIAY
ALGFIDADNI SARCMLTIFQ FFAAKTEASV LRMLNGSPYE YLHKPIVDYL EARGTKIYTR
KKVRQIQFLE NDGETRVSGI VIANGDTEVT ITADAYVFAC DVPGIQRILP EAWRKWPEFD
NIYKLDAVPV ATVQLRFDGW VTELHNKNQR QQLDHAAGID NLLYTPDADF SCFADLALTS
PEDYYRQGEG SLLQLVLTPG DPFIKENNEA IAHHVLKQVH ELFPSSRELN MTWYSVVKLA
QSLYREAPGM DPYRPNQKTP VPNFFLAGSY TQQDYIDSME GATISGKQAA QIILTNVEKI
LGQ
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