Gene Tery_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3940 
Symbol 
ID4244023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6095560 
End bp6096402 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content27% 
IMG OID638108861 
Producthypothetical protein 
Protein accessionYP_723443 
Protein GI113477382 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0715627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000463304 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAATGCT TAGTTAATAG TCATTTCAGT TATCAATTAT CAATTATCAA CTACCCTTAT 
CTAGACTTTT TCTCTTGTTT CTGGAAGCTT AAATTATTTG ACATTAGCTC TAGCAGATAT
ATTCTGTTAG AGCCATTTTT TTTTAATTCA ATAAAGCATA GTCATTTCAT TTATCAATTA
TCAATTATCA ACTACCCTTA TCTAGACTTT TTCTCTTGTT TCTGGAAGCT TAAATTATTT
GACATTAGCT CTAGCAGATA TATTCTGTTA GAGCCATTTT TTTTTAATTC AATAAAGCAT
AGTCATTTCA TTTATCAATT ATCAATTATC AACTACCCTT ATCTAGACTT TTTCTCTTGT
TTTTGGAAGC TTAAATTATT TGAAATTAGC TCTAGCAGAT ATATTCTGTT AGAGCCATTT
TTTTTTAATT CAATAAAGCA TAGTCATTTC ATTTATCAAT TATCAATTAT CAACTACCCT
TATCTAGACT TTTTCTCTTG TTTTTGGAAG CTTAAATTAT TTGACATTAG CTCTAGCAGA
TATATTCTGT TAGAGCCATT TTTTTTTAAT TCAATAAAGC ATAGTCATTT CATTTATCAA
TTATCAATTA TCAACTACCC TTATCTAGAC TTTTTCTCTT GTTTTTGGAA GCTTAAATTA
TTTGACATTA GCTCTAGCAG ATATATTCTG TTAGAGCCAT TTTTTTTTAA TTCAATAAAG
CATAGTCATT TCATTTATCA ATTATCAATT ATTAACTACC CTTATCTAGA CTTTTTCTCT
TGTTTCTGGA AGCTTAAATT ATTTGACATT AGCTATGGAT GCTTATGCAA GTCAGAGTGT
TAA
 
Protein sequence
MKCLVNSHFS YQLSIINYPY LDFFSCFWKL KLFDISSSRY ILLEPFFFNS IKHSHFIYQL 
SIINYPYLDF FSCFWKLKLF DISSSRYILL EPFFFNSIKH SHFIYQLSII NYPYLDFFSC
FWKLKLFEIS SSRYILLEPF FFNSIKHSHF IYQLSIINYP YLDFFSCFWK LKLFDISSSR
YILLEPFFFN SIKHSHFIYQ LSIINYPYLD FFSCFWKLKL FDISSSRYIL LEPFFFNSIK
HSHFIYQLSI INYPYLDFFS CFWKLKLFDI SYGCLCKSEC