Gene Tery_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3935 
Symbol 
ID4244018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6085669 
End bp6086754 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content34% 
IMG OID638108857 
Producthypothetical protein 
Protein accessionYP_723439 
Protein GI113477378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00372357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000463304 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAACA GTACAAAAAA GACCGTCAAA ACTATTATTA TAGCAGCTAT TACCTCTATA 
ATTATTTCCC CAACTTTTGC TTTATTCAGA CCTGTTATTG GGAAACAAAA TATAGCGATC
GCTCCCCAAA AAACTACAAG TGTTAGAAGT CCTGAAAGAA ATTATATTGC CACAACTCCA
CAAATATCAA CTGGAGCTAT TGTACAACTA GAAGGTCTCA ACTTACCACG GCCGAAAGTA
ACTGGAATTA CCACTATTCC TCTCAAATTT TTAGACAGTG GAACAGCATT TACTTTAACA
GCTACTTTAG GGAAAAAATC CGGTGATTTT TTATTAGATA CAGGAGCTTC TACTACAATG
ATTTCTACAA AAATAGTCAA AGAATTAGGA TTAAAAGGAG AACCTATACC AAAAGAACTT
TTAACTTATG CAGTAGCTGG AGATGAGTGC CCCGAAATGA AAGCTAATTT GCATCGTTTA
CCTGTGTTAA AAATTGATGA TGTTAAAGTC GAAAAATTAG CTGGTTTAGA GTTTACTACT
ACTATAATGC CAGGAGAATT ATCAGGAGTT TTGGGGATGG ATATTTTAAG TAATTTTGAT
GTAGAAATAA ACCCTAAAAC CCAAGAGTTA CGGTTACTAT CTCCCACGAT CATACCCGCT
AAAAATATTA AAGATGCTAT CCCACTTAAA TCTAAATTAG GAGTCATGTT AGCCGAGGTA
GAAATTAATG GCAACGGTCC GTTTATTTTT ATGTTAGATA CGGGAGCAGA AAGTATTTTT
ATTTCTCAGA AATTAGCTAG TCAGTTAAAA ATTACTGCTG CCGAAAGACA GGCAGTTCGA
GTCCAGGGTT TTTGTGGCAT TGAAATGGCA GAATTAGCTT CCTTAGCTCA GGTGAAAATG
GGAAATTATG AGTTGAGAAA ATTAGAAACA GTAATTTTAT CTTCCCCGGT ATTAGAGTTA
TTAGAAGTTG ATGGAATTTT AGGGCAAAAC TTTTTTAATA ATTATCAACA ACATTGGCGC
TTTGATCAAA AAAATGAAGA ATTTCCTTCA GGAGGAAGTT TATTATTAAA ACAGAGTAGG
CAGTAG
 
Protein sequence
MRNSTKKTVK TIIIAAITSI IISPTFALFR PVIGKQNIAI APQKTTSVRS PERNYIATTP 
QISTGAIVQL EGLNLPRPKV TGITTIPLKF LDSGTAFTLT ATLGKKSGDF LLDTGASTTM
ISTKIVKELG LKGEPIPKEL LTYAVAGDEC PEMKANLHRL PVLKIDDVKV EKLAGLEFTT
TIMPGELSGV LGMDILSNFD VEINPKTQEL RLLSPTIIPA KNIKDAIPLK SKLGVMLAEV
EINGNGPFIF MLDTGAESIF ISQKLASQLK ITAAERQAVR VQGFCGIEMA ELASLAQVKM
GNYELRKLET VILSSPVLEL LEVDGILGQN FFNNYQQHWR FDQKNEEFPS GGSLLLKQSR
Q