| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3919 |
|---|
| Symbol | |
|---|
| ID | 4244002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6054014 |
|---|
| End bp | 6055195 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638108842 |
|---|
| Product | hemolysin-type calcium-binding region |
|---|
| Protein accession | YP_723424 |
|---|
| Protein GI | 113477363 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.525194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA TTTTAGGAGA TGACAATAAT AACTTCTTAA TAGGTTCTCC AGAACCTGAC
CTTATGGAAG GTTTTGGTGG AAATGACACT ATTTTTGGTG AAAAAGGAGA TGATACTCAA
AGCGGAGGAG ATGGAGTCGA CGAAATTTTT GGTGGCATTG GATCTGATTC TTTAATTGGT
GGTGAAGATA ACGATTTTCT AAAAGCAGAA GATGGACGCG ACTTAGCATT TGGAGGTCCT
GGAGATGATA GTATTGAAGG TGGTCCCGGA AATGATACCC TAACAGGAGA AAATGGCAAC
GACTCTTTAT TTGGAGAAAC TGGAGATGAC CTTATAATAG GTAGCCAAGG ACTTGATTAT
ATTATTGGAG GAGGAGGTAA CGATACATTA AGAGGTAATC AAGGGAATGA TAGTCTAGTT
GGAAATGTTG ATGATGATCT AATATTTGGG GACCAAGGAA ACGATACTGG CAGTGGAGGT
ACAGGTAATG ATTCTCTTTT AGGTGGTGAT GGTGATGACT CTTTAGACGG AGGTAGTGGT
AATGATACTA TATTTGGTGA ATCAGGTAAC GATTCTCTAT TTGGCATTAT TGGCAGTGAT
TTTATTAATG GTAATAGGGG TAACGATCAA GTTTTTGGTG GAGAAAATGC AGATAATCTT
CGTGGTGGAA AAGGTAATGA TACAATATTT GGAGAACTTG AGAATGACTC TCTCTTCGGT
GACTCAAACA ACGACCTAGT TATTGGTGGT ATTGGTGATG ATACATTGTT TGGTGGAAAG
AATAATGATA CCCTTCAAGG TAGTGATGGT AATGACTCTT TGTTAGGGGA TCTAGGCAAC
GATATATTAT TTGGAGGTGG GGGAGAAGAT ACATTAACTG GTGGTGAGGG AGAAGACACT
TTTGTACTAC CTGGAGAACT AGGTAGTATT GATATAATTA ATGATTTTAA TCCCTTAGAA
GATTTCTTAG CTTTAAGTGG TAATTTAACT TTTGAGGATT TAAGTTTTCA ACAACAAACT
GGCTTAAACT TCAGAGATAC ATTAATCACT ATTAATAATG ACAGATTATT AGCCATATTA
GTAAATGTTC CAGCCTCCAT AATTTCAGAG AAAGACTTCA TAGATGTTAG CCAACCTTTA
CTTGATTTTG ATTCTAAGTA TACTGGCAAT GAAGTTTTAT AA
|
|---|
| Protein sequence | MANILGDDNN NFLIGSPEPD LMEGFGGNDT IFGEKGDDTQ SGGDGVDEIF GGIGSDSLIG
GEDNDFLKAE DGRDLAFGGP GDDSIEGGPG NDTLTGENGN DSLFGETGDD LIIGSQGLDY
IIGGGGNDTL RGNQGNDSLV GNVDDDLIFG DQGNDTGSGG TGNDSLLGGD GDDSLDGGSG
NDTIFGESGN DSLFGIIGSD FINGNRGNDQ VFGGENADNL RGGKGNDTIF GELENDSLFG
DSNNDLVIGG IGDDTLFGGK NNDTLQGSDG NDSLLGDLGN DILFGGGGED TLTGGEGEDT
FVLPGELGSI DIINDFNPLE DFLALSGNLT FEDLSFQQQT GLNFRDTLIT INNDRLLAIL
VNVPASIISE KDFIDVSQPL LDFDSKYTGN EVL
|
|---|
| |