| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3917 |
|---|
| Symbol | |
|---|
| ID | 4244000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6052171 |
|---|
| End bp | 6053007 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638108840 |
|---|
| Product | photosystem II manganese-stabilizing protein PsbO |
|---|
| Protein accession | YP_723422 |
|---|
| Protein GI | 113477361 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.791043 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATC GCACTTTAAT TGCTCTACTA TTAGCTGTGT GTTTGAGTGT TTTAACTGCC
TGTTCAGAAA CCCCTGATAG CAATAAACCA CTTACTTATG AAGACATTGT AAATACTGGC
TTGGCCAACA ACTGTCCAGA ATTACCAGAA ACTGCTCGTG GTTTTATTGC CATTGACCAA
AGTCAATCTT ATACCTTAAC AGATTTGTGT TTGAAGCCAA CGACCTATTT CGTTAAGGAA
GAACCAACTA ATAAACGCCA AAAAGCAGAG TTTATTCAAG GAAAAAAATT AACTCGTTAC
ACTTCTACCT TAGATCAAAT AACAGGTGAA CTCGTTTTTA ATGAAGATAA TTCTTTGACA
TTTAACGAAC AATATGGTAT TGATTTTCAA CCTATAACTA TTCTTTTACC AGGTGGAGAA
GAAGTACCGT TTCTATTTAC TGTCAAAGGA CTTAGTGCTA AGAGCCAGCC TAATATTACT
GCTATCAATA CTTCTACTGA TTTTCAGGGA CTATACAATG TTCCTTCCTA CCGAGGCTCT
AGTTTCTTAG ACCCTAAAGG TCGTGGTGTC ACTTCAGGAT ATGATAATGC AGTAGCTTTG
CCAGCTAGTT CAGATTCTCA AGGGCTTGTT AAAGCCAATG TTAAGTCGGC AGAGACTCTT
CTCAAAGCTG GTGAAATGTC CCTTCAAATT ACTAAAGTAG ACGGCGAAAC AGGTGAAGTT
GTTGGTATAT TTGAGGCCAT TCAGCCTTCT GATACAGATT TAGGAGCAAA AGAAGCTCTA
GAAGTTAAAG TTCGTGGTAA TTTTTACGGT CGGGTAGACA CCGACACAAT TTCTTAG
|
|---|
| Protein sequence | MKYRTLIALL LAVCLSVLTA CSETPDSNKP LTYEDIVNTG LANNCPELPE TARGFIAIDQ
SQSYTLTDLC LKPTTYFVKE EPTNKRQKAE FIQGKKLTRY TSTLDQITGE LVFNEDNSLT
FNEQYGIDFQ PITILLPGGE EVPFLFTVKG LSAKSQPNIT AINTSTDFQG LYNVPSYRGS
SFLDPKGRGV TSGYDNAVAL PASSDSQGLV KANVKSAETL LKAGEMSLQI TKVDGETGEV
VGIFEAIQPS DTDLGAKEAL EVKVRGNFYG RVDTDTIS
|
|---|
| |