| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3916 |
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| Symbol | |
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| ID | 4243999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6050404 |
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| End bp | 6051168 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638108839 |
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| Product | RNA polymerase sigma factor SigF |
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| Protein accession | YP_723421 |
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| Protein GI | 113477360 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACCA ACATCACTCA AGAACTAAAA AGTGAAACCA TAAAACTGTT ACAGCAATAT
CAACAGTTTC CTTCTTATGA ACTTCGGAAC AAATTAGTTC AACTTAATGT TGGACTTGTA
AGAAAAGAAG CTTATCATTG GTTAAATAAA TGTAGCGAAA CTTATGATGA TTTACTCCAA
GTCGGATATA TTGGATTAAT TCTAGCAATT GAACGATTTG ATGTTTCTAA GGCACGAGCC
TTCAGTTCTT TTGCTACTCC TTATATCAGA GGAGAAATTA AGCATTATTT AAGAGATAAA
AGCCCTTCTG TACGCATCCC CAGAAATTGG TTAGCTATAG ATCGGCAGGC CACGAAAGTG
ATACAAGACC TGAGAATGAA GTTCCAGCGA AAACCTACAG ATCAAGAAGT AGCTTCTGCT
CTAGGTATTT CTTTAGACCA GTGGCATAAA ATTCAAATGG CCTGTCGTAA CCTTGCTCCT
CTGAGTTTAG ATGCTCCAGT TCAAGATCAA GCTTATGGAT CTACTAGTTT GGGAGAATTA
GTCCCGGATA GTCAGTATCG TAGTTTTCAG TTAGCTCAAG AAGACCAAAT TCGTTTACAG
CAAGCATTGT CTAAATTGGA GGAGAGCACT CGTAAGGTTT TGGAGTTTGT TTTTCTCTGT
GACTTGACTC AAAAGGAAAC AGCCGAGCGA ATGGGAATTA GTGCTGTTAC TGTATCTCGG
AGAGTCAAAA ATGGCTTAAA ATGTCTGCAA AAGATAATGC AATAG
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| Protein sequence | MSTNITQELK SETIKLLQQY QQFPSYELRN KLVQLNVGLV RKEAYHWLNK CSETYDDLLQ
VGYIGLILAI ERFDVSKARA FSSFATPYIR GEIKHYLRDK SPSVRIPRNW LAIDRQATKV
IQDLRMKFQR KPTDQEVASA LGISLDQWHK IQMACRNLAP LSLDAPVQDQ AYGSTSLGEL
VPDSQYRSFQ LAQEDQIRLQ QALSKLEEST RKVLEFVFLC DLTQKETAER MGISAVTVSR
RVKNGLKCLQ KIMQ
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