Gene Tery_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3915 
Symbol 
ID4243998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6049362 
End bp6049724 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content36% 
IMG OID638108838 
ProductPadR family transcriptional regulator 
Protein accessionYP_723420 
Protein GI113477359 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.507829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTT TTGAGGAAAT TTATCAATTT TTCCAAAGTC CCCCTCCATT CTATCTAAAT 
AAAGAACTAG CAGTATGCTA TGTCCTATTT ATACTATTGC AAAGAGACTC TTATGGAACC
GAATTGATTG GCCAAGTAAA AAGAGACTAT CCTATTTATC GACTTTCCGA TACTGTGTTG
TATAGTGCTC TAAAATTTCT GGAAGACCAA GGTATAGTTA TTGGCTATTG GAAAAAAGTG
GGAGGAAGAG GACGTCCACG GAAAATGTAT CAACTTATTC CTCAGTGGCG ACCCCAAGCT
ATAAATTTAG CAAGACTTTG GTCTGAATAT ACTAATCATC CTCATATTCG GCCTCAAATT
TAA
 
Protein sequence
MTSFEEIYQF FQSPPPFYLN KELAVCYVLF ILLQRDSYGT ELIGQVKRDY PIYRLSDTVL 
YSALKFLEDQ GIVIGYWKKV GGRGRPRKMY QLIPQWRPQA INLARLWSEY TNHPHIRPQI