Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3903 |
Symbol | |
ID | 4243566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6030966 |
End bp | 6033395 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638108828 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_723410 |
Protein GI | 113477349 |
COG category | [S] Function unknown |
COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAATTT GGAAAAATTT GAGGTTAGTT ATATCTATTG TATGTCTATT AATTGTTCCT CCATCTATGA TAGTCGATAA AAAAGCGAAT ATAAATTCAC AAGCACTGAC AAAGCCGACA AAAAATGAGA GTTATTATAT TTCACAAAAT AATCTAAAAA CTGAAATACA GAAACTTGAG CAACAAGCAA CTGAAGAATT TAATAATGGT AAATTTGAGG TTGCTTTAGA ACAATTTAAA CAAGTATTAG AAATTTATAC TCAACAGAGC GATCGCTTTG GAATTATTCA AACTTTAGAT AAAATTGCTG TTGTTTATGA TGCTCAAGGT AAATATCTGA AAGCTTTAGA ATTTTATCAG AAAACATTAG AAAAGACTCA ACAGGAGAAA AGTAGTGAAG ATATTAGTGC TATTTTAAGT AAGATTGGTT TAGTTTATTC CCAGTTAGGT CAGTATGAAA AAGCTATAGA TTTTTATCAG CAATCTTTAA ATAAAAATTA TCCAGAACAA GCTATTATTT TAAATAAAAT TGGAACAATT TATTACCATT TAAAACAATT TTCTAAAGCT TTAGAATATT ATCAACGAGC TTTAGAGGTT AATCGGAAAA ATAAAGATAA TACTGGTATA GCAAAAACTC TAGATAATAT AGGTGTAACT TATCGAGAAC AGGAAAAATA TTCTGAAGCA TTAAAATATC ATCAAGAAGC ATTAGCTATT AAAGAAAAAA TTGGTGATAA CTATAATAAT TCAGCTACTC TTCATCATAT TGGCTTAGTT TATAGAGAAT TAAATAAACA TTCAGAAGCT CTAAAATTTT TAACTAAAAC TTTGATTATT GAACGACAAC TTGGGCACCA AGATAAAGAG AGAATTACTC TTGCTAATAT AGGTAAATTA TTAGAAAGAA AGAATCAAGA TCAATTAGCA ATAATTTTTT ATAAACAATC AATTAATATT ACTGAAAATA TTAGGAAAGA TTTAAAAAAA TTACCAGTAG AACGGCAAAA TTTACATATA AAAAGTATTC TTGAAATCTA TCGTATTTTG GCTGACTTAT TGCTCCAACA AAAACGTGCT TTAGAAGCAC ATCAAATCTT AGATTTACAG CAAGTACAAG AAATATTTGA ATATATGGGG AACTTACAAA CTGATGAATA TGAATATAGT GAAGTTCCAT TGCTAGAGTC AGAAAAAGTG TTTTGGGAAA AATATACTCA GCTAATAGAT GAAGTTGATA AAAGCCATAA ACAAAATCCA AATCACTTAG AGGAAAAATT AGTAAAAATT CAGCAATTTT TTGATAGTGA GGAAGTAAAA TCTATAATTT CAGAATTAGA GAAAAATGCT AGGAGTCAAA AGCTAAATTC AGATATAGTA CTTTGGTTAC AGTCTGAACT AAAGGAGCAT AAGCAAAAAA ATACTGTAGT CTTATATCCA TTACTTTTAG AAAATCGATT AGAATTAGTA TTAGTTAGTG CTAATTATCC TCCATTTCAT CGAACTGTTT TAGTAAATGA GAAAGAGTTT AATCAAACAA TATTTCGATT AAGAGGAAAA TTAACAAATA AAAATAAGTC TAATCAAATA GTTATGCAGG AAGGATTAAA ACTATATAAT TGGTTGATTA AACCTATAGA AATTTACCTC AAACTTATTC AAGCTCAAAC AATTATTTAT GCACCTGACC AGAAACTACG TTATATTCCA TTGGCAGCAC TATATGATGG AAAAAAATGG TTAGTAGAAA GATTTAAGGT TAATAATATT ACTGCTGCAA GTTTAATGGA CTTAGAACCT AGAGAAAGAT TTAAACCTAC AATTTTAGCA GGTGCTTTAA CAGAAGGAAG TTATAATTTT GAAGTTGGTA AACAAAAGTT TGAATTTGAA TCATTACCCT TCGCTGGAGT AGAGGTAGAG GAAATAGAGA AGATATTTCC TGATACAAAT AAATTGTTAG GCAATGGCTT TACTAAAGAA GCAGCAGAAT CAAAAATGAA TAGCTATAAT ATTGTACATT TTGCTACTCA TTCTGCTTTT ATAACTGGTC ATCCAGAAGA ATCTTTTATA TTATTTGGAG ATGGCGCTCT CGCTACTTTA CGAGATGTAG AAAATTGGAA TTTACAGGAT GTAGAATTAG TAGTTTTGAG TGCTTGTCAA ACTGCTTTAG TAGAACAGAC AGCAAATGGT CAAGAAATAC TCGGTTTTGG TTATAAGATA CAAGAAGCTG GAGCAGCGGC AAGTATAGCA ACTCTATGGC GAGTTGATGA TCAAGGTACT CAAGAATTTA TGAATGATTT TTATACGGCT TTGAAGAATG GAGAAAGCAA GACAGTAGCA TTACAAAAGG CACAAATTTC TATGATTAAT AGTGAGTACA GTCACCCCTC TTATTGGGCA CCATTTATTT TAATTGGAAA TGGGCTGTGA
|
Protein sequence | MIIWKNLRLV ISIVCLLIVP PSMIVDKKAN INSQALTKPT KNESYYISQN NLKTEIQKLE QQATEEFNNG KFEVALEQFK QVLEIYTQQS DRFGIIQTLD KIAVVYDAQG KYLKALEFYQ KTLEKTQQEK SSEDISAILS KIGLVYSQLG QYEKAIDFYQ QSLNKNYPEQ AIILNKIGTI YYHLKQFSKA LEYYQRALEV NRKNKDNTGI AKTLDNIGVT YREQEKYSEA LKYHQEALAI KEKIGDNYNN SATLHHIGLV YRELNKHSEA LKFLTKTLII ERQLGHQDKE RITLANIGKL LERKNQDQLA IIFYKQSINI TENIRKDLKK LPVERQNLHI KSILEIYRIL ADLLLQQKRA LEAHQILDLQ QVQEIFEYMG NLQTDEYEYS EVPLLESEKV FWEKYTQLID EVDKSHKQNP NHLEEKLVKI QQFFDSEEVK SIISELEKNA RSQKLNSDIV LWLQSELKEH KQKNTVVLYP LLLENRLELV LVSANYPPFH RTVLVNEKEF NQTIFRLRGK LTNKNKSNQI VMQEGLKLYN WLIKPIEIYL KLIQAQTIIY APDQKLRYIP LAALYDGKKW LVERFKVNNI TAASLMDLEP RERFKPTILA GALTEGSYNF EVGKQKFEFE SLPFAGVEVE EIEKIFPDTN KLLGNGFTKE AAESKMNSYN IVHFATHSAF ITGHPEESFI LFGDGALATL RDVENWNLQD VELVVLSACQ TALVEQTANG QEILGFGYKI QEAGAAASIA TLWRVDDQGT QEFMNDFYTA LKNGESKTVA LQKAQISMIN SEYSHPSYWA PFILIGNGL
|
| |