Gene Tery_3899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3899 
Symbol 
ID4243562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6025595 
End bp6026158 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content31% 
IMG OID638108825 
ProductNUDIX hydrolase 
Protein accessionYP_723407 
Protein GI113477346 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATT TAAAAAAATG GAAGCTTTTA CAATCTAGGT TAGTAATTAA TCATCAATGG 
TGTCAAGTAA GACAGGATGA AGTTGAGTTA CCGAATGGTA AAATTATAGA TGATTTTTTT
GTTAATGTTA GGCAAGATAT TGTTCTTGTT TTTCCTGTGA CTGATCAGCA AGAAATTGTA
TTTGTCCGTC AATATAGACA TGGAGTAGGT AAAGTTTTAT TAGAGTTACC GGCAGGATAT
TTTAATCCTC AAGTAGAGTT TCCTGAAGTA GCTGCGATGA GAGAATTGAG AGAAGAAACT
GGATATGTTG CCGAGAAATT AATTAAATTA AAAACTTTAT ATGATAATCC TGTTAAAGAT
ACTAATTCTA TTCATTTCTT TGCTGCTAAA AATGTGATCA AATCTCAAAA ACAAGAGCTT
GATATTACAG AAGAAATTGA AGTGGTCTTA ATACCTGTTT CTGAGGTTCT TCAGAGAGTA
TTGATGACAG ACATAAATGT TTGTGGAACT ATCGCAGCTA TATTTTTAGG ATTAGAATAC
TTGCGCAACA ATAAATTAGG ATGA
 
Protein sequence
MTNLKKWKLL QSRLVINHQW CQVRQDEVEL PNGKIIDDFF VNVRQDIVLV FPVTDQQEIV 
FVRQYRHGVG KVLLELPAGY FNPQVEFPEV AAMRELREET GYVAEKLIKL KTLYDNPVKD
TNSIHFFAAK NVIKSQKQEL DITEEIEVVL IPVSEVLQRV LMTDINVCGT IAAIFLGLEY
LRNNKLG