| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3869 |
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| Symbol | |
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| ID | 4243532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 5980539 |
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| End bp | 5985200 |
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| Gene Length | 4662 bp |
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| Protein Length | 1553 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638108799 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_723381 |
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| Protein GI | 113477320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.113625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0582417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATAG AAGCTTTAGT TGTTGGAATT AATGAACATG TATTTGAACC TGGTTTAAAC
CTTAAAGCTC CAGTTAAAGA TGCTGAAGCT ATTGCTGAAA TGTTGGAAAA GTATGGCAAT
TTTCATGTTC AAGGTTTGCC AAAAGATTAT GATGAAACTG GTAGGGAAAG ATTTATATCT
GATGGCTTTG TTTATAGGAA AAACCTCAAA ATAAAAGTTA GTAATTTATT TAATCCTATC
TCAAAAAATG AAATTCCTGA TGTGGCTTTA TTCTTTTTTG CTGGTCATGG TTTTGTAACA
ACAGAAGGGG GTGTTAGAGA AGGATTTTTA GTAACTAGTG ATGTGCAATT AAAAAGGGAT
ATTTATGGCA TATCTTTAAG TTGGTTGAAA GATTTATTAC GCCAAAGTCC GGTGAAAAAA
CAAATTGTTT GGTTAGACTG TTGTTTTGGT GGGGAATTAT TAAATTCTCA AGAGGCTGAC
CCTGGTACTG GAAAAGAAGT AAGTCGCTGT TTTATTACTT CTTCTCGTTC TTTTGAAAAA
AGTGTGTCAG AAATAGATGG AAAACATGGT GTTTTTACGG CTAATTTACT TAAAGGTTTA
AATCCAGAAA GTTCTATTGA TGGTTGGGTT ACTAACTATA TTTTGGCAGA TTCTATTAAG
AATAATATGC TGAATATTTC TCAATCTCCT GTTTTTCATA ATTCAGGAGA TGCGATTATT
CTGACTACTA ATACTCAGAC TAAATCTCTA GACGGACGTT GGAAAAAAAC TCCTCCTTAT
CGGGCTTTAT CTTATTTTAC TGAACAGGAA AAAGATGGGG TATTTTTTTA TGGTAGAACT
CAGTTGACTG ATGAGTTAAT TGACCGAGTT AGAACTAATA ATTTTGTGGC GGTTTTGGGG
GCTTCGGGTA GTGGAAAGTC TTCTTTGTTA CGGGCGGGTT TGTTATATCA ATTGAAGCGG
GGGCAGAAAA TATCTGGAAG TGACAGATGG TTATATATTA AGCCTTTTAC TCCGAGTTCT
TCTCCTCTGG AAAGTCTGCA AAAGGCAGTT AATATAAAGA GTGAAAAAAT AGAGAATTTA
ACGGAAAAAC TGATCGATTT TATTAATGAA GTAAAGGCGG AAAAAGTCTT GATGGTAATT
GACCAATTTG AGGAGTCTTT TACTCTCTGT GAAACTGATG AAAAACGACG GGAATTTTTT
GATTGTTTTT TGTCTGTTTT GGCAAATGAA AAAACTAAAA ATAAGTTTTG TTTGGTCTTA
GGAATGCGGG CAGATTTTCT TGACCAATGT TCAAAATATT CTGGGTTGGC AACAGAAATT
AAGGAGCATC AATTATTAGT AACTCCTTTG GAAAAGGATG AGATAGAGGA AGCAATTAAG
AAGCCGGCGG AATTAGTGGG AATGGGAGTA GAACCTAAGT TAGTTGCTCA AATGGCAGCA
GATTTTTTGC GTAATCCTGG TAGTTTACCT CTGTTACAAT ATACTTTGGA TGCTCTGTGG
AAATCTGCTA CTCAAGGGGA GGATAAAAGT CAATATTTAA CTCTGGCAAG TTATGAAAAG
TTGGGTGGAA TTCAGGGTAC TTTGACGAAG CAAGCTGATG CAGTTTATGA GAGTTTGAAT
AAAGAGAAAA AGTCGGTTGC CAAGAGGATA TTTTTAGAGT TAGTTCAGCC TGGGGAACGG
TCAGTTAATT TTCTCAAGGT AACGGATACT CGGCGGCGAG TAATTTTGGA AAAGTTGCCT
AATAAAGAAC ATACTTTAGA GCTTTTATTG GAGGTTAGTG ATAATTTGGC TGACCCAAAT
AATCGATTAA TTACTAAGGA TAAGTCAGAG GCAGGAACAT TATTAGATAT TATTCATGAG
GACTTAATTA GAAGTTGGAA AACTTTGAGG AAATGGGTGG AGGAATATCA AGAGGCTTTG
CCGGTGGAAA GGAAAATTGA GGCTGATGCG GCTGGGTGGG AAAAGGATGG AAAAAATGAG
GGTTTGTTAT TACGAGAAAC TCAGTTAACT AAGGCAGAAG AATATGTGAC AAAGTATGGG
GATATGGGTT TGTTGGATGG GTTGGCTTAT GAATTTATTG AGGCGAGTCA GGAGTTGAGA
ATTCGTGAGG AAAAGGAAGA AAAGGAACGT AAAGAAAGGG AGTTAGAGCA AGAAAAGAAA
GCTAGAAAAT TAGCTCAAAG ACGGAATCAA ATTTTGGGTG TTTCTTTGGT TTTAATGACT
GGGGTATCTG GTTATGCTTG GATGCAGCAA AACATAGCTA AACATAATAG TGAAATATTC
TTTACCCGTC AGTTAGCGGC AAAAGCAGAA TTATTGACAA CTTATAACAG TTATGACACA
ACTGTTTTGT TGGGAGTCCA GTCAATGAAC AGAATTCAAG AATTTAAAGA ATGGCAAGAC
TCTGGGTGGC GAAAAGTGGT TAGGAAATTT TTAGGGAGTC AGTTCTCAGA TATACCTCAA
AATGCCGCTG ATGGAGCTAT TCGCAAAGGG TTAACTCAAC TGCCTGATCA TCTCCATACT
CTCAACCACC AGGACAGGGT AATAGCAGTA GCCTTTAGCC CCGACGGCAA AACCATTGCA
ACTGCAAGTT ATGACAATAC CGCCCGCCTC TGGGATACTG AGAATGGCAA TGTATTAGCT
ACTCTCAACC ACCAGTCCAG GGTAAGAGCA GTAGCCTTTA GCCCCGACGG CAAAACCATT
GCAACTGCAA GTTCTGACAA AACCGCCCGC CTCTGGGATA CTGAGAATGG CAAAGAATTA
GCTACTCTCA ACCACCAGGA CTCGGTAAGA GCAGTAGCCT TTAGCCCCGA CGGCAAAACC
ATTGCTACTG CAAGTAATGA CAAAACCGCC CGCCTCTGGG ATACTGAGAA TGGCAAAGAA
TTAGCTACTC TCAACCACCA GGACTCGGTA AGAGCAGTAG CCTTTAGCCC CGACGGCAAA
ACCATTGCTA CTGCAACTTC TGACAAAACC GCCCGCCTCT GGGATACTGA GAATGGCAAT
GTATTAGCTA CTCTCAACCA CCAGTCCAGG GTAAGAGCAG TAGCCTTTAG CCCCGACGGC
AAAACCATTG CAACTGCAAG TTATGACAAA ACCGCCCGCC TCTGGGATAC TGAGAATGGC
AAAGAATTAG CTACTCTCAA CCACCAGTTC TGGGTAAATG CAGTAGCCTT TAGCCCCGAC
GGCAAAACCA TTGCTACTGC AAGTTCTGAC AATACCGCCC GCCTCTGGGA TACTGAGAAT
GGCTTTGAAT TAGCTACTCT CAACCACCAG GACAGGGTAT GGGCAGTAGC CTTTAGCCCC
GACGGCAAAA CCATTGCTAC TGCAAGTGAT GACAAAACCG CCCGCCTCTG GGATACTGAG
AATGGCAAAG AATTAGCTAC TCTCAACCAC CAGTCCTCGG TAAATGCAGT AGCCTTTAGC
CCCGACGGCA AAACCATTGC TACTGCAAGT AGAGACAATA CCGCCCGCCT CTGGGATACT
GAGAATGGCA AAGAATTAGC TACTCTCAAC CACCAGGACA GGGTATGGGC AGTAGCCTTT
AGCCCCGACG GCAAAACCAT TGCAACTGCA AGTTTAGACA AAACCGCCCG CCTCTGGGAT
ACTGAGAATG GCTTTGAATT AGCTACTCTC AACCACCAGG ACTGGGTAAG AGCAGTAGCC
TTTAGCCCCG ACGGCAAAAC CATTGCAACT GCAAGTTATG ACAATACCGC CCGCCTCTGG
GATACTAAGA CTCGCAAAGA ATTAGCTACT CTCAACCACC AGGACTGGGT AATAGCAGTA
GCCTTTAGCC CCGACGGCAA AACCATTGCT ACTGCAAGTA GAGACAAAAC CGCCCGCCTC
TGGGATACTG AGAATGGCAA AGTATTAGCT ACTCTCAACC ACCAGCTCGA TATAAATGCA
GTAGCCTTTA GCCCCGACGG CAAAACCATT GCTACTGCAA CTTCTGACAA AACCGCCCGC
CTCTGGGATA CTGAGAATGG CAAAGTATTA GCTACTCTCA ACCACCAGTC CAGGGTATTT
GCAGTAGCCT TTAGCCCCGA CGGCAAAACC ATTGCAACTG CAAGTTATGA CAAAACCGCC
CGCCTCTGGG ATACTGAGAA TGGCAAAGTA TTAGCTACTC TCAACCACCA GTCCTCGGTA
AATGCAGTAG CCTTTAGCCC CGACGGCAAA ACCATTGCAA CTGCAAGTTA TGACAAAACC
GCCCGCCTCT GGGATACTGA GAATGGCAAA GTATTAGCTA CTCTCAACCA CCAGTCCTCG
GTAAATGCAG TAGCCTTTAG CCCCGACGGC AAAACCATTG CAACTGCAAG TTCTGACAAA
ACCGCCCGCC TCCATTGGAC AACACCAAAA GGCTTAATTC AAGAAGGTTG TCGCCGTCTG
AGTCGGAATT TAACAGCAGA GGAGTGGCAG CAGTATATCA ACAGCGACTT GGAGACATAT
CAGAAAACTT GCAAAAATAT TCCCGTTCAT CCTAGTTTAA TTGCAGAAGC TAAAAATCTT
GCAAAAACAG GGGAAAAACC GAAAATCAAA CAGGCAATTT CTATCTTCAA AAAAGCTCTA
GAATTGGAAC CAGAAATTGA CCTCGATCCT GATACAGAAA CTAGAGAAAC AGACCCCCAA
CTTGTAGCAA ATAAACTTGC TGCTTCTGCC AAATTAAAAT AA
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| Protein sequence | MRIEALVVGI NEHVFEPGLN LKAPVKDAEA IAEMLEKYGN FHVQGLPKDY DETGRERFIS
DGFVYRKNLK IKVSNLFNPI SKNEIPDVAL FFFAGHGFVT TEGGVREGFL VTSDVQLKRD
IYGISLSWLK DLLRQSPVKK QIVWLDCCFG GELLNSQEAD PGTGKEVSRC FITSSRSFEK
SVSEIDGKHG VFTANLLKGL NPESSIDGWV TNYILADSIK NNMLNISQSP VFHNSGDAII
LTTNTQTKSL DGRWKKTPPY RALSYFTEQE KDGVFFYGRT QLTDELIDRV RTNNFVAVLG
ASGSGKSSLL RAGLLYQLKR GQKISGSDRW LYIKPFTPSS SPLESLQKAV NIKSEKIENL
TEKLIDFINE VKAEKVLMVI DQFEESFTLC ETDEKRREFF DCFLSVLANE KTKNKFCLVL
GMRADFLDQC SKYSGLATEI KEHQLLVTPL EKDEIEEAIK KPAELVGMGV EPKLVAQMAA
DFLRNPGSLP LLQYTLDALW KSATQGEDKS QYLTLASYEK LGGIQGTLTK QADAVYESLN
KEKKSVAKRI FLELVQPGER SVNFLKVTDT RRRVILEKLP NKEHTLELLL EVSDNLADPN
NRLITKDKSE AGTLLDIIHE DLIRSWKTLR KWVEEYQEAL PVERKIEADA AGWEKDGKNE
GLLLRETQLT KAEEYVTKYG DMGLLDGLAY EFIEASQELR IREEKEEKER KERELEQEKK
ARKLAQRRNQ ILGVSLVLMT GVSGYAWMQQ NIAKHNSEIF FTRQLAAKAE LLTTYNSYDT
TVLLGVQSMN RIQEFKEWQD SGWRKVVRKF LGSQFSDIPQ NAADGAIRKG LTQLPDHLHT
LNHQDRVIAV AFSPDGKTIA TASYDNTARL WDTENGNVLA TLNHQSRVRA VAFSPDGKTI
ATASSDKTAR LWDTENGKEL ATLNHQDSVR AVAFSPDGKT IATASNDKTA RLWDTENGKE
LATLNHQDSV RAVAFSPDGK TIATATSDKT ARLWDTENGN VLATLNHQSR VRAVAFSPDG
KTIATASYDK TARLWDTENG KELATLNHQF WVNAVAFSPD GKTIATASSD NTARLWDTEN
GFELATLNHQ DRVWAVAFSP DGKTIATASD DKTARLWDTE NGKELATLNH QSSVNAVAFS
PDGKTIATAS RDNTARLWDT ENGKELATLN HQDRVWAVAF SPDGKTIATA SLDKTARLWD
TENGFELATL NHQDWVRAVA FSPDGKTIAT ASYDNTARLW DTKTRKELAT LNHQDWVIAV
AFSPDGKTIA TASRDKTARL WDTENGKVLA TLNHQLDINA VAFSPDGKTI ATATSDKTAR
LWDTENGKVL ATLNHQSRVF AVAFSPDGKT IATASYDKTA RLWDTENGKV LATLNHQSSV
NAVAFSPDGK TIATASYDKT ARLWDTENGK VLATLNHQSS VNAVAFSPDG KTIATASSDK
TARLHWTTPK GLIQEGCRRL SRNLTAEEWQ QYINSDLETY QKTCKNIPVH PSLIAEAKNL
AKTGEKPKIK QAISIFKKAL ELEPEIDLDP DTETRETDPQ LVANKLAASA KLK
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