| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3858 |
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| Symbol | |
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| ID | 4243520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5959527 |
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| End bp | 5960936 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638108788 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_723371 |
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| Protein GI | 113477310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.784369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0678057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAATC ATTCTATCCA AACCGAAAAA CTTAATTTTT GGACAAAATT AGCTTATGGT
GCTGGTGATT TCGGTCCTGC TATTTGTGCT AATATCCAGT TATTTTTCTT ATTGCCTTTT
TTCACTAACG TTGTTGGTTT ACCTGCTGAT ATCGCAGGTA GTATTTTGAT GATTGGAAAA
ATTTCTGATG CTGTTAATGA CCCTATAATT GGAGTGATGA GTGATCGCAC TGTTCATCCT
TGGGGAAGGC GTTATCCTTG GATGGTTTTT GGAGCTATTC CTTTTGGAGT TTTGTTCTGT
TTGCAATGGA TAGTTCCTAG TACAAATCAG TCTTTTTTAT TTTGGTATTA TGTAGTGATA
GCGGTTTTAT TTAATATTGC TTATACTGTT GTTAATTTGC CCTACGCTGC CCTAACTCCA
GAACTAACGC AAGATTTCGA TGAACGTACT AGTTTAAATA GTTTTAGATT TGCATTTTCT
ATTGGTGGTA GTATTCTTTC TTTGGTTATT GTTAAATTGA TTTTTTCTCT TTTTCAGGAT
AATCCTATTC AAAAATATTT CTTGGTTGGC TTGGTCTGTG CTATAATTTC TGTTTTACCT
ATTTATTGGT GTTTTTTTGG TACCCGCGAT CGCGCACTTT CTCATAATGG AAAACAGAAA
GAAGATAATA ATACAAATTT ACCAATTGTT GAACAAATTC GTGTAGCTTT TAGTAATCGT
CCATTTCTAT TTGTGATCGG AATTTATCTG TGTTCTTGGT TAGCAGTACA ATTAACAAGT
TCAGTTTTGT ATTACTTTGT AATAAATTGG ATGCAGCTAC CAGAAGTGAC TCATCCCAAT
GTTGCGATCA CTGTGCAAGG TACTGCTTTA ATTATGTTAT TTTTCTGGAG TTTTGTTAGT
AAAAAGGTAG GTAAAAAAGC AGTTTATTTT ATGGGTATTT GTTTATGGAT AATTGCTCAG
TGTGGATTAT TTTTTATCCA ACCAGGACAA GTTGCTTTAA TGTATTTTTT GGCAGTAATA
GCAGGTTTTG GAGTATCAAC TGCTTATTTA GTTCCTTGGT CAATGATACC AGATGTTATT
GATTTAGATG AGTTAAATAC AGGGCAAAGA AGGGAAGGAA TTTTTTATTC TTTTATGGTT
TTTTTGCAAA AGCTAGGGTT AGCTATTGGG TTGTTTTTAG TAGGAGTAGC TTTAGATCTT
GCTGGGTTTA TTGAAACTAT CCCTGGGGAA ACTCCACCTA TTCAACCAGA GTCAGCACTT
ATAGCAATTC GAGTAGCGAT CGCTCCCTTA CCTACTATAT TTTTAATGCT TGGATTATTG
TTAACTTATC TATATCCTAT TACACGAGAA ATACATAATG AAATATTGTT GAAATTGGGG
GAAAGAAAAC AAAAAAGAGG TAAGACTTGA
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| Protein sequence | MNNHSIQTEK LNFWTKLAYG AGDFGPAICA NIQLFFLLPF FTNVVGLPAD IAGSILMIGK
ISDAVNDPII GVMSDRTVHP WGRRYPWMVF GAIPFGVLFC LQWIVPSTNQ SFLFWYYVVI
AVLFNIAYTV VNLPYAALTP ELTQDFDERT SLNSFRFAFS IGGSILSLVI VKLIFSLFQD
NPIQKYFLVG LVCAIISVLP IYWCFFGTRD RALSHNGKQK EDNNTNLPIV EQIRVAFSNR
PFLFVIGIYL CSWLAVQLTS SVLYYFVINW MQLPEVTHPN VAITVQGTAL IMLFFWSFVS
KKVGKKAVYF MGICLWIIAQ CGLFFIQPGQ VALMYFLAVI AGFGVSTAYL VPWSMIPDVI
DLDELNTGQR REGIFYSFMV FLQKLGLAIG LFLVGVALDL AGFIETIPGE TPPIQPESAL
IAIRVAIAPL PTIFLMLGLL LTYLYPITRE IHNEILLKLG ERKQKRGKT
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