Gene Tery_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3846 
Symbol 
ID4242297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5943650 
End bp5944426 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content38% 
IMG OID638108778 
Productmicrocompartments protein 
Protein accessionYP_723361 
Protein GI113477300 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0700872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCC ACAATAACTA TAATAAGCTA GAATCTATCG AATCCCCAAT TCAGTTTGGA 
GATGCTGCTC TTGGTTTAGT GACAACTAGG AGTTTTCCGG CCATAGTTGG TACTGCTGAT
ATGATGCTAA AGTCATCTGG TGTAATTTTG GTAGGCTATG AAAAAATTGG TAGTGGATAT
TGTACGGCGG TAGTTCGTGG TGGTATTGCT GATGTTCGTT TAGCGGTAGA GTCTGGAGCA
AAAACTGCTG AAAAGTTTGG ACAACTGATT TCTAAGACTG TTATTCCTCG ACCTTTGCCT
AATTTAGAAG TTGTATTACC TATTGGTAGC CTTTTACTTA AACTATCTCA AGGTAGAGTG
TCTGATGAGT TTAGACATAA AGCAGTTGGT CTAATAGAGA CTAGAGGTTT TCCGGCAATG
GTGGGAGCTT GTGACGCGAT GCTCAAATCT GCTGATGTAC AGTTGACTGC TTATCAAACT
ACAGGTGCAG GTTTATGTAC TGCTATTGTT CGTGGTTCGG TTTCTAATGT AGCGGTAGCT
ATAGAAACTG GTATGTACGA AGCAGAAAGA ATTGGAGAAT TAAATGCTGT AATGGTAATT
CCTAGAGCAT TAGATGATTT AGAAAAAACA TTACCTATAG CTGGTCATCT GATTAAAGAA
AAACCTGAAC CTTTACGTTT ACCAATAGCA GTTAAAGATC AGGAAAAAGA GCTTGTAAGA
TTACCAGATT TTTCCCAACT TCCTTTACCG ATCAAAGAAG AACTTAAGGA TAAATAA
 
Protein sequence
MQTHNNYNKL ESIESPIQFG DAALGLVTTR SFPAIVGTAD MMLKSSGVIL VGYEKIGSGY 
CTAVVRGGIA DVRLAVESGA KTAEKFGQLI SKTVIPRPLP NLEVVLPIGS LLLKLSQGRV
SDEFRHKAVG LIETRGFPAM VGACDAMLKS ADVQLTAYQT TGAGLCTAIV RGSVSNVAVA
IETGMYEAER IGELNAVMVI PRALDDLEKT LPIAGHLIKE KPEPLRLPIA VKDQEKELVR
LPDFSQLPLP IKEELKDK