Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3846 |
Symbol | |
ID | 4242297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 5943650 |
End bp | 5944426 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638108778 |
Product | microcompartments protein |
Protein accession | YP_723361 |
Protein GI | 113477300 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0700872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACCC ACAATAACTA TAATAAGCTA GAATCTATCG AATCCCCAAT TCAGTTTGGA GATGCTGCTC TTGGTTTAGT GACAACTAGG AGTTTTCCGG CCATAGTTGG TACTGCTGAT ATGATGCTAA AGTCATCTGG TGTAATTTTG GTAGGCTATG AAAAAATTGG TAGTGGATAT TGTACGGCGG TAGTTCGTGG TGGTATTGCT GATGTTCGTT TAGCGGTAGA GTCTGGAGCA AAAACTGCTG AAAAGTTTGG ACAACTGATT TCTAAGACTG TTATTCCTCG ACCTTTGCCT AATTTAGAAG TTGTATTACC TATTGGTAGC CTTTTACTTA AACTATCTCA AGGTAGAGTG TCTGATGAGT TTAGACATAA AGCAGTTGGT CTAATAGAGA CTAGAGGTTT TCCGGCAATG GTGGGAGCTT GTGACGCGAT GCTCAAATCT GCTGATGTAC AGTTGACTGC TTATCAAACT ACAGGTGCAG GTTTATGTAC TGCTATTGTT CGTGGTTCGG TTTCTAATGT AGCGGTAGCT ATAGAAACTG GTATGTACGA AGCAGAAAGA ATTGGAGAAT TAAATGCTGT AATGGTAATT CCTAGAGCAT TAGATGATTT AGAAAAAACA TTACCTATAG CTGGTCATCT GATTAAAGAA AAACCTGAAC CTTTACGTTT ACCAATAGCA GTTAAAGATC AGGAAAAAGA GCTTGTAAGA TTACCAGATT TTTCCCAACT TCCTTTACCG ATCAAAGAAG AACTTAAGGA TAAATAA
|
Protein sequence | MQTHNNYNKL ESIESPIQFG DAALGLVTTR SFPAIVGTAD MMLKSSGVIL VGYEKIGSGY CTAVVRGGIA DVRLAVESGA KTAEKFGQLI SKTVIPRPLP NLEVVLPIGS LLLKLSQGRV SDEFRHKAVG LIETRGFPAM VGACDAMLKS ADVQLTAYQT TGAGLCTAIV RGSVSNVAVA IETGMYEAER IGELNAVMVI PRALDDLEKT LPIAGHLIKE KPEPLRLPIA VKDQEKELVR LPDFSQLPLP IKEELKDK
|
| |