| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3843 |
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| Symbol | gatB |
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| ID | 4242294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5936030 |
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| End bp | 5937514 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638108775 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_723358 |
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| Protein GI | 113477297 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.714509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACCA CTGTACCAGT TAAAACAAAG TATGAAGCCA TTATTGGCCT AGAAACCCAT
TGTCAGCTTA GTACCCAAAC TAAAATTTTC TCTAATTCCT CCACAGAATT TGGTGCCACG
CCTAATACCA ACATTGACCC AATATGTATG GGAATGCCAG GAGTATTACC TGTACTTAAT
GAAAAAGTTT TAGAATATGC TGTCAAAGCA GGGTTGGCCC TAAATTGTGA AATTGCACTC
TACAGTAAAT TTGACCGGAA ACAATATTTC TATCCAGACT TACCTAAAAA CTATCAAATT
TCTCAGTATG ATTTGCCGAT CGCTGAACAT GGTTGGTTAG AAATAGAAAT AGTAGAAGAG
GATGGTAATG CAACTCGTAA AAAAATTGGT ATTACTAGAC TGCATATGGA GGAAGATGCA
GGTAAGTTAG TCCACGGAGG TAGCGATCGC TTATCTGGTT CGACTTATTC AATGGTAGAT
TACAACCGTG CTGGTGTACC ATTAATAGAA ATTGTATCAG AACCGGATAT CCGTTCTGGA
ATAGAAGCTG CCGAATATGC TCAAGAATTA AGGCGAATTG TTCGCTATCT TGGAGTTAGT
GATGGAAATA TGCAGGAAGG TTCCTTGCGA TGTGATGTAA ATGTTTCTGT GCGACCTGTT
GGCCAAAAAG AATTTGGCAC AAAGGTAGAA ATTAAAAACA TGAACTCCTT CAGCGCCATA
CAACGAGCGA TCGAATATGA AATTGAGCGG CAAACTGAAG CTATTGAAAC AGGGGAGAAA
ATTATTCAAG AAACTCGACT CTGGGAAGAG GCCTCTCAAT GTACTGTTAG CATGAGGACT
AAAGAGGGCT CTAGTGACTA TCGTTATTTT CCAGAACCTG ACATTCCACC TATTGAAGTC
TCAACTCAGC AGCTAGATAC TTGGAAAGCT GAATTACCAG AATTACCTGC ACAAAAACGT
TACCTTTATG AAAGTAAGTT AGGTTTATCT GCTTATGATA CTCGTGTTCT GACTGACGAC
TTTAATGTGG CAAAATATTT TGAAGCGGCA GTTGCAGCAG GTGGAAACTC TAAACAAGTA
GCTAACTGGG TAATGGGAGA TATTACGGCT TTTTTGAAAA ATGAAAAAAT TAGTATTAAT
GATATTACTC TAAAACCTGA TAATTTGGCC GAGCTAGTCA CAATTATTGA TGATGGTACT
ATCAGTGGTA AAATTGCTAA GGATATACTG CCAGAGTTAT TATCTAAAGG TGGGTCGCCC
AAGGAATTAG TAGAGAAAAA AGGCTTGATT CAAATTTCAG ATATTAAGGC AATAGAAGCA
ATTATAGATG AAGTTTTAGC AGCACATCCG GAAGAGTTAG CAAAATATCG CGGCGGTAAA
ACAAAACTCA AAGGTTTCTT TGTTGGGCAA GTGATGAAAA AAACACAAGG TCGTGCTGAT
CCAAAGATGA CAAATCAATT AATTAGTAAG AAGTTAGAAG GGTAA
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| Protein sequence | MTTTVPVKTK YEAIIGLETH CQLSTQTKIF SNSSTEFGAT PNTNIDPICM GMPGVLPVLN
EKVLEYAVKA GLALNCEIAL YSKFDRKQYF YPDLPKNYQI SQYDLPIAEH GWLEIEIVEE
DGNATRKKIG ITRLHMEEDA GKLVHGGSDR LSGSTYSMVD YNRAGVPLIE IVSEPDIRSG
IEAAEYAQEL RRIVRYLGVS DGNMQEGSLR CDVNVSVRPV GQKEFGTKVE IKNMNSFSAI
QRAIEYEIER QTEAIETGEK IIQETRLWEE ASQCTVSMRT KEGSSDYRYF PEPDIPPIEV
STQQLDTWKA ELPELPAQKR YLYESKLGLS AYDTRVLTDD FNVAKYFEAA VAAGGNSKQV
ANWVMGDITA FLKNEKISIN DITLKPDNLA ELVTIIDDGT ISGKIAKDIL PELLSKGGSP
KELVEKKGLI QISDIKAIEA IIDEVLAAHP EELAKYRGGK TKLKGFFVGQ VMKKTQGRAD
PKMTNQLISK KLEG
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