| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3835 |
|---|
| Symbol | |
|---|
| ID | 4242286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5922960 |
|---|
| End bp | 5923469 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638108768 |
|---|
| Product | allophycocyanin, beta subunit |
|---|
| Protein accession | YP_723351 |
|---|
| Protein GI | 113477290 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01337] allophycocyanin, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.946215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACA CTATAACTAG CTTAATAAAA AATTACGATA TTAAAGGTCG TTATTTGGAC
CAAAATGGGA TTGATCAATT AAAATCTTAT TTTGAAACTG GTACTGCAAG AGTACAAGCT
GCAACCCTAA TTAATTCTCA GGCAGCTAGT TTAGTAAAAC AAGCTGCAAT TACTTTGTTT
GCAGAACAAC CAGAATTAAT CCGTCCCGGT GGTAATGCTT ATACAACTCG TCGTTATGCA
GCTTGTCTGC GGGACATGGA CTATTATCTA CGCTATGCTA CTTATGCTTT AGTAGCAGGT
AATACAGACG TTTTAGATGA GCGTGTGTTG CAAGGGCTTC GGGAAACTTA TAATTCTTTA
GGAGTACCTA TTGGACCTAC TTTGATAGGT ATTAGCATTC TTAAAGAACT TATTAAGTCT
AAGGTAGAGG CTGCAGGTAT TCAAACTGGT GCTTTTTTGG CCGAACCCTT CGATCATCTA
ATTAATGAGT TGGCAGAAAA GGATATTTAA
|
|---|
| Protein sequence | MQDTITSLIK NYDIKGRYLD QNGIDQLKSY FETGTARVQA ATLINSQAAS LVKQAAITLF
AEQPELIRPG GNAYTTRRYA ACLRDMDYYL RYATYALVAG NTDVLDERVL QGLRETYNSL
GVPIGPTLIG ISILKELIKS KVEAAGIQTG AFLAEPFDHL INELAEKDI
|
|---|
| |