Gene Tery_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3808 
Symbol 
ID4242259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5855340 
End bp5856146 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content32% 
IMG OID638108743 
Producthypothetical protein 
Protein accessionYP_723326 
Protein GI113477265 
COG category[S] Function unknown 
COG ID[COG3689] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.150551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAG CAAAATCATT ATTTTATATA CTCAAAAAAT ATGAATCTTG GTTGGATGCT 
GGAGCAATTT TTACTTGGGG CTTTTTATTA ATAAATTATT GGTTGACAGG AAAGTTATAT
ATATTGATTC ATCCCCGTTA TTTTGGTTTA ACTATTGCTG CTGGCATTGG GTTATTAATA
TTAGGTGGAT GGAAATTATT GCAGTTATGG AATATCAATA AAAACCACCA AATATCTAGG
CAATCAAAAG AAAAAGTTAG TCTAATTAAA AATGAACATA TTAACTTTTT TGCTCCTGGT
TGGAGTAGTT TTTTACTGTT AGTATCTGCT CTACTAGCTT TAACAATTAC CCCTCAAGTC
TTTGGGAGTC AAACTGCTTT GCAAAGAGGG TTAACAGAAT CTTTGCCAGT AACTAGAACT
CAACCTCAAA AATTTCGTAG TACGATTAAA CCAGAAGAGC GATCTCTAAT TGAATGGATT
AGGACTTTAA ATGTTTATCC AGAACCAGAT GCTTATAATG GTCAAAAAGT TGAAGTAAGT
GGTTTTGTAA TTTATCCTAG GGGATTATCT GAGCAATATA TGTGGATATC TAGATTTATT
CTAACTTGCT GTGCTGCTGA TGCTTATCCA GTGGGATTAC CAGTTAAATT ACCAGCAAGC
AAAAGTCGGA GTGAATATCC TCAAGATGGT TGGTTTAAAG TAGAAGGAAT AATGATTACT
GATGAGTTTA ACGGTAAACG TAAATTAACA ATTTTGCCAA CAGAAATAGA ATCAATTCCT
AAGCCTAAAA ATCCTTATGA TTATTAG
 
Protein sequence
MKVAKSLFYI LKKYESWLDA GAIFTWGFLL INYWLTGKLY ILIHPRYFGL TIAAGIGLLI 
LGGWKLLQLW NINKNHQISR QSKEKVSLIK NEHINFFAPG WSSFLLLVSA LLALTITPQV
FGSQTALQRG LTESLPVTRT QPQKFRSTIK PEERSLIEWI RTLNVYPEPD AYNGQKVEVS
GFVIYPRGLS EQYMWISRFI LTCCAADAYP VGLPVKLPAS KSRSEYPQDG WFKVEGIMIT
DEFNGKRKLT ILPTEIESIP KPKNPYDY