Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3808 |
Symbol | |
ID | 4242259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5855340 |
End bp | 5856146 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638108743 |
Product | hypothetical protein |
Protein accession | YP_723326 |
Protein GI | 113477265 |
COG category | [S] Function unknown |
COG ID | [COG3689] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.150551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAG CAAAATCATT ATTTTATATA CTCAAAAAAT ATGAATCTTG GTTGGATGCT GGAGCAATTT TTACTTGGGG CTTTTTATTA ATAAATTATT GGTTGACAGG AAAGTTATAT ATATTGATTC ATCCCCGTTA TTTTGGTTTA ACTATTGCTG CTGGCATTGG GTTATTAATA TTAGGTGGAT GGAAATTATT GCAGTTATGG AATATCAATA AAAACCACCA AATATCTAGG CAATCAAAAG AAAAAGTTAG TCTAATTAAA AATGAACATA TTAACTTTTT TGCTCCTGGT TGGAGTAGTT TTTTACTGTT AGTATCTGCT CTACTAGCTT TAACAATTAC CCCTCAAGTC TTTGGGAGTC AAACTGCTTT GCAAAGAGGG TTAACAGAAT CTTTGCCAGT AACTAGAACT CAACCTCAAA AATTTCGTAG TACGATTAAA CCAGAAGAGC GATCTCTAAT TGAATGGATT AGGACTTTAA ATGTTTATCC AGAACCAGAT GCTTATAATG GTCAAAAAGT TGAAGTAAGT GGTTTTGTAA TTTATCCTAG GGGATTATCT GAGCAATATA TGTGGATATC TAGATTTATT CTAACTTGCT GTGCTGCTGA TGCTTATCCA GTGGGATTAC CAGTTAAATT ACCAGCAAGC AAAAGTCGGA GTGAATATCC TCAAGATGGT TGGTTTAAAG TAGAAGGAAT AATGATTACT GATGAGTTTA ACGGTAAACG TAAATTAACA ATTTTGCCAA CAGAAATAGA ATCAATTCCT AAGCCTAAAA ATCCTTATGA TTATTAG
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Protein sequence | MKVAKSLFYI LKKYESWLDA GAIFTWGFLL INYWLTGKLY ILIHPRYFGL TIAAGIGLLI LGGWKLLQLW NINKNHQISR QSKEKVSLIK NEHINFFAPG WSSFLLLVSA LLALTITPQV FGSQTALQRG LTESLPVTRT QPQKFRSTIK PEERSLIEWI RTLNVYPEPD AYNGQKVEVS GFVIYPRGLS EQYMWISRFI LTCCAADAYP VGLPVKLPAS KSRSEYPQDG WFKVEGIMIT DEFNGKRKLT ILPTEIESIP KPKNPYDY
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