Gene Tery_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3796 
Symbol 
ID4243744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5833654 
End bp5834811 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content39% 
IMG OID638108731 
Producttetratricopeptide TPR_2 
Protein accessionYP_723315 
Protein GI113477254 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.367432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACAAAC AAAAAATACC AATACTTAAT AGTGTAATAG TGGGTCTTAT TTTGGCCACT 
ATTCCTTCTA TTGCTTACGG AGCTCCTTGT GAACAAATAA GGAAGACAAA TGAAACCTCA
ATTACTTTTC CAAGTTGTGG GGACAAATTA TGGGCTCGAG TTGATCAAAC TGCGGGTTCA
GAACTAGATG AACTACTACG TCAGGGACGA GAATTAGCAG ATGAGAAAAA ATATCAAGAA
GCCATAAGAA TATATCAACA GGCAGTACGT TTAGACCCCA AAAATGCTAC GATATATTCG
GGTATTGCTT ACTTGGAAGC AGTGCAAGAA AATTTCCAAG CGGCAGCTCT ATTTTACCAA
CAGGCGATAG CTATAGATCC TCATAATGCA AAGTTTCAAT ATGGTTTAGG ATATGCTATG
GCAAAATTGG AAAATTATCA GGCGGCAGTT GAGGCTTATC GCCGTGCTTC TCTCCTAGAC
CGAAATAATG TTAATACTCA TTTAGGTTTG GGTGCTGCAT TGTTTCGCCT GGAGAAATAT
GGTGAGGCAA GGGTTGCATA TGAAGTAGCA ATTAAATCTA ATCCTAAAAA TCCTGAAGCT
TATGCTGCGA TGGGCTTAGT GTTACTTAAG GAAAGACTTT TTCCTGAAGC ATTAGTACAT
TTACGAGAGG CTGAAAAGTT ATCTCCTAGA AATGCGGAGA TACAAATTAA GTTGGCGACT
GCTTTATTAG CGGCTGCAGA TACTAAGGGC GCTTTGGTAG CTCTGGAGTT AGCTTCTCGT
TTGGAACCTC GAAATGCAGA TATTCAGTTT CAAGTTGGGG AAATTTATCA GGCGCAGAAT
AATACTGAAG GTGCTTTGAG GGCTTATAAA AGAGCTTTTT ATGTTGACCG ATCGTTGTTG
AAAGCTAAGT TTGCTGCTGC GGGGATACTT TTAGAACAGC AGAATTATTT AGAGGCAATA
ATTATTTATC GGCGAGTTAT TCAAGCTGAT CCTGAGAATG CAGATGCTCA TTATAAAATG
GGGTTGGCTC TTCAAGGTAG AGAACGCAAA GGGGAAGCAT TAAGAGCTTT TGAAACTGCT
TTAAAATTAT TTGAGGAACA GGATAATTTT GAGGGTAAGG AAATGGTGGA AAGTATGATG
GTGGAGTTGG AAGATTAA
 
Protein sequence
MYKQKIPILN SVIVGLILAT IPSIAYGAPC EQIRKTNETS ITFPSCGDKL WARVDQTAGS 
ELDELLRQGR ELADEKKYQE AIRIYQQAVR LDPKNATIYS GIAYLEAVQE NFQAAALFYQ
QAIAIDPHNA KFQYGLGYAM AKLENYQAAV EAYRRASLLD RNNVNTHLGL GAALFRLEKY
GEARVAYEVA IKSNPKNPEA YAAMGLVLLK ERLFPEALVH LREAEKLSPR NAEIQIKLAT
ALLAAADTKG ALVALELASR LEPRNADIQF QVGEIYQAQN NTEGALRAYK RAFYVDRSLL
KAKFAAAGIL LEQQNYLEAI IIYRRVIQAD PENADAHYKM GLALQGRERK GEALRAFETA
LKLFEEQDNF EGKEMVESMM VELED