Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3796 |
Symbol | |
ID | 4243744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5833654 |
End bp | 5834811 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638108731 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_723315 |
Protein GI | 113477254 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.367432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACAAAC AAAAAATACC AATACTTAAT AGTGTAATAG TGGGTCTTAT TTTGGCCACT ATTCCTTCTA TTGCTTACGG AGCTCCTTGT GAACAAATAA GGAAGACAAA TGAAACCTCA ATTACTTTTC CAAGTTGTGG GGACAAATTA TGGGCTCGAG TTGATCAAAC TGCGGGTTCA GAACTAGATG AACTACTACG TCAGGGACGA GAATTAGCAG ATGAGAAAAA ATATCAAGAA GCCATAAGAA TATATCAACA GGCAGTACGT TTAGACCCCA AAAATGCTAC GATATATTCG GGTATTGCTT ACTTGGAAGC AGTGCAAGAA AATTTCCAAG CGGCAGCTCT ATTTTACCAA CAGGCGATAG CTATAGATCC TCATAATGCA AAGTTTCAAT ATGGTTTAGG ATATGCTATG GCAAAATTGG AAAATTATCA GGCGGCAGTT GAGGCTTATC GCCGTGCTTC TCTCCTAGAC CGAAATAATG TTAATACTCA TTTAGGTTTG GGTGCTGCAT TGTTTCGCCT GGAGAAATAT GGTGAGGCAA GGGTTGCATA TGAAGTAGCA ATTAAATCTA ATCCTAAAAA TCCTGAAGCT TATGCTGCGA TGGGCTTAGT GTTACTTAAG GAAAGACTTT TTCCTGAAGC ATTAGTACAT TTACGAGAGG CTGAAAAGTT ATCTCCTAGA AATGCGGAGA TACAAATTAA GTTGGCGACT GCTTTATTAG CGGCTGCAGA TACTAAGGGC GCTTTGGTAG CTCTGGAGTT AGCTTCTCGT TTGGAACCTC GAAATGCAGA TATTCAGTTT CAAGTTGGGG AAATTTATCA GGCGCAGAAT AATACTGAAG GTGCTTTGAG GGCTTATAAA AGAGCTTTTT ATGTTGACCG ATCGTTGTTG AAAGCTAAGT TTGCTGCTGC GGGGATACTT TTAGAACAGC AGAATTATTT AGAGGCAATA ATTATTTATC GGCGAGTTAT TCAAGCTGAT CCTGAGAATG CAGATGCTCA TTATAAAATG GGGTTGGCTC TTCAAGGTAG AGAACGCAAA GGGGAAGCAT TAAGAGCTTT TGAAACTGCT TTAAAATTAT TTGAGGAACA GGATAATTTT GAGGGTAAGG AAATGGTGGA AAGTATGATG GTGGAGTTGG AAGATTAA
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Protein sequence | MYKQKIPILN SVIVGLILAT IPSIAYGAPC EQIRKTNETS ITFPSCGDKL WARVDQTAGS ELDELLRQGR ELADEKKYQE AIRIYQQAVR LDPKNATIYS GIAYLEAVQE NFQAAALFYQ QAIAIDPHNA KFQYGLGYAM AKLENYQAAV EAYRRASLLD RNNVNTHLGL GAALFRLEKY GEARVAYEVA IKSNPKNPEA YAAMGLVLLK ERLFPEALVH LREAEKLSPR NAEIQIKLAT ALLAAADTKG ALVALELASR LEPRNADIQF QVGEIYQAQN NTEGALRAYK RAFYVDRSLL KAKFAAAGIL LEQQNYLEAI IIYRRVIQAD PENADAHYKM GLALQGRERK GEALRAFETA LKLFEEQDNF EGKEMVESMM VELED
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