Gene Tery_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3786 
Symbol 
ID4243734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5818499 
End bp5819272 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content40% 
IMG OID638108722 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_723306 
Protein GI113477245 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.554974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATTT ATAGATTACC AGCACTTTCA GACAACTATA TTTTCTTATT GCATGACCCA 
AATCAAAATA TTGGGGCTGT AGTCGATCCT GCCGAAGTTA GGCCAGTAAT AGACAAACTA
GAATCCTTGG GAGCTGAGTT GGTGACTATT TTTAATACTC ACCATCATTT CGATCATGTA
GGTGCTAATA AACAGTTAAT CCAAAAGTTT CCCCAATTGA AAGTTTATGG TGGAGTAGAA
GACCGAGGCA GAATTCCTGG ACAACAAGTA TTTTTACAGG AAGGCGATCG TGTCCACTTT
GCCGATAGAG TAGGAGAGGT TTTATTTGTT CCTGGCCATA CAATTGGCCA TATTGCTTAT
TATTTTCCTT CTGTAGCTTT TGGGGAAACA GGAGAATTAT TTTGTGGTGA TACTTTATTT
GCTGGTGGTT GTGGTCGTTT ATTTGAAGGT ACACCAGCCC AAATGGTAGA TTCTTTGAAC
AAATTACGCA ACTTACCTGA CAATACTCGA ATATGGTGTG CCCATGAATA TACTTTAAAA
AACTTACAGT TTGCGATAAC CGTTGATAAG GACAATACTG ATTTACAATC TCGTTGGGCT
GAGGTTAAGA CAGCACGTGG TCGTAATGAA GCAACTGTAC CATCAATGAT AGGTGTAGAA
AAACGCACAA ATCCTTTTCT GCGCTGGGAG CAACCTGCCC TACAATTAGC AGTTCAAAGT
CAAGATCCAG TACAAACTTT CGCTCGTCTG CGAGGAAGGA AAGATAGATT TTAA
 
Protein sequence
MDIYRLPALS DNYIFLLHDP NQNIGAVVDP AEVRPVIDKL ESLGAELVTI FNTHHHFDHV 
GANKQLIQKF PQLKVYGGVE DRGRIPGQQV FLQEGDRVHF ADRVGEVLFV PGHTIGHIAY
YFPSVAFGET GELFCGDTLF AGGCGRLFEG TPAQMVDSLN KLRNLPDNTR IWCAHEYTLK
NLQFAITVDK DNTDLQSRWA EVKTARGRNE ATVPSMIGVE KRTNPFLRWE QPALQLAVQS
QDPVQTFARL RGRKDRF