Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3777 |
Symbol | |
ID | 4243725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 5806790 |
End bp | 5807896 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638108713 |
Product | geranylgeranyl reductase |
Protein accession | YP_723297 |
Protein GI | 113477236 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.218559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATT GTATAATTAT AGGGGCAGGT CCAGCAGGAA GTACAGCAGC TTATCATTTG GCTAAGAAAG GACGTTCTGT TTTAGTGATA GAAAAGGAAT CTTTCCCTAG AGTTAAAGCT TGTGGTGGTG GGGTATCTCC AGCGATCGCT CAATGGTTTG ACTTTGATTT AACTCCAGCT ATTTCTCTCA AGGTTAATAA AATTCGTTAT ACATGGAAAT TAGAAGACCC TATTGAAGCA GATTTACCCG TTCCTATGTG GATGGTAAAA CGAGATGTTT TCGACTATTT TCTCATCCAA AAAGCTACAG AACAAGGTGC AGAATTAAGA GACAAAACAG AAGTTACAGG TATTGAATTT AAACGTGATT CTTGGGAAGT TAAAACAATT AAGGAACCTG TTGTTGGTCG TTATTTAATT GCTGCTGATG GAGCCAAAGG ACCAATGTCT AAATGGTTAG GTTTTAAAGA ATCTAAAAAA CGGCAAAGTC TAGTTTTTGA AGCACCATTA AATGAGTCAA ATAAAAAAGC TACCTTTGAA TTTGGTTCAG TTAAAAATGG TAATATTTGG GGTTTCCCCA AAGCAGATTC CTGCTCTATT AGTATTGCGA CTTTTAGGGG CGGGGAATCC AAAAATCTAT CTAAAGATTT GATGGGATAC GTTCAACAAA TTGGTGTAAA TGTAAGTCAA AATCAATTAT TAGAACATTA TATTTCTCTA TGGGATGGAG AGAAAAATCT TCATACTCAA AATGCGATAT TGGCAGGAGA AGCAGCAAGT TTATCAGACC CTTTATCAGC AGAAGGAATT CGCCCTTCAA TTTTTAGTGG TGTCAAAGCC GCTGAAGCTA TAGATGAAGC TTTAGGTGGT AATGGGGATG CTCTGAAAAA ATACACTCAG ATAGTTAATG AGGAATGGGG TACAGATATG GCTTGGGCGG GTCGTTTAGC AGGAGCATTT TATCGGTTTC CTAAGGTAGC TTATAAAGTG GGGGTTAAGT TACCAGCAGC TACTACAGTA ATGAGTAAAA TTATGTGTGG AGAAATGCGT TATGCGGATA TTGCTAATAC TGCAATTAAA AAGCTAACTA GTAGTTTTTT ACCATGA
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Protein sequence | MFDCIIIGAG PAGSTAAYHL AKKGRSVLVI EKESFPRVKA CGGGVSPAIA QWFDFDLTPA ISLKVNKIRY TWKLEDPIEA DLPVPMWMVK RDVFDYFLIQ KATEQGAELR DKTEVTGIEF KRDSWEVKTI KEPVVGRYLI AADGAKGPMS KWLGFKESKK RQSLVFEAPL NESNKKATFE FGSVKNGNIW GFPKADSCSI SIATFRGGES KNLSKDLMGY VQQIGVNVSQ NQLLEHYISL WDGEKNLHTQ NAILAGEAAS LSDPLSAEGI RPSIFSGVKA AEAIDEALGG NGDALKKYTQ IVNEEWGTDM AWAGRLAGAF YRFPKVAYKV GVKLPAATTV MSKIMCGEMR YADIANTAIK KLTSSFLP
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