Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3771 |
Symbol | |
ID | 4243719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5793963 |
End bp | 5799539 |
Gene Length | 5577 bp |
Protein Length | 1858 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638108708 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_723292 |
Protein GI | 113477231 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0182471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCTT TAAAATATCC GGAAGAAAGT ATTATTTATA ATAAGCGATC GCTCACAAGA TTGATGAGAT CTGTCACCAT TTCTCAGGGA CAGTTTTCGT TGATTTTAGC CTGCTGTAAC TACCAACACT TCCAGCAAAG AATGATGATG GAAGTGAAAA AAATGTTATC AGTAGAACTG CAAGAAATAG TATTATCAAA AACTGTCACT ACTCTTTATA CAACTATCGA TCAACAATTA GAAAAGTTCC CCGAAGCTCC TGCAGTAATG ATCTTAAACT TAGATAAAGT AGAAGCAATA GATGAACTAC TAATATCGAC TAATCAGGTA AGAGACGAAT TTAGGAAAAA ATTTAGCTTT CCTCTAATTT TGTGGATTAC AGATAAATTA TTGGCTAAAC TAATTAGATT AGCACCTGAT TTTAAAAGTT GGGCAGCAGC TACAATTAAA TTTGAGTTTG CGACTTCCGA TTTAATACAT TTACTAAAAA TGGCAATAGA TAGTTATTGG ATAAATGAAT CGGCAAATGA ACAACAACAA TTAATAAAAT CATCATCAAA TTCTACAAAA TATAATTTTT TAGTCCCTAG TTTTCTCGAT CAATCTAATT GTTATTATGG TAAGAAGTTA TCTCAAAATA AACATCAAGA AATTCAATTA GCTTTCAAAG ATTTAAAAGA ACGTGAACAG CATTTAGAAA CAACTCTTAA AGCAAAGATA GAATTTATTA TTGGTCGAGA TTACTTCTAT AACAACAATA TAGATTCTGC TCTCGAACAT TATCAAGAAA GTCTAAATTT ATGGGAGTAT AAAATTGGGT CATTAGAGTA TCCTAAATCA TCAATAATTA GCGAGAGGTT TATCCTAGAA CAAAAAGGAA TAGTTTTATA TAATATTGCC TTGTGTTATT ATCTGCAATC TACCCAAAAC CCCTTAGATA ATTATCAAGA ATTAGAAAAG GCAAAACTGA AGCTTGAAGA ATCAAAACAA CTTTTTGAAG AAGTGAATAA TTTTGTCTTG GTAGCTGAGG TAATTACAAC ATTAGGACAA GCTATAAAGC AGATGAAAGC TTGGGGAGAA TTAGAAGCTA TTGCCTTAGA AGGACTACAA TTACATCACA AATATGGAAA TGATTTACAA ATAGCACAAG ATTATGGTTT TTTGGCAGAA GTTGCCCTAC AAAAATCCAA TTGGGTTGAG GCTCAGAAGC TATCTGAAAG AGCCCTTAAT ATTTTGTTTT ATGCTAAAGA TATAACATTA CCAACGGAAA AAAATAAATA CCTGTTATTA TTAGCAAAAA GTCTCAAAAA TTTATATCGT CAAGCAGAAG CTATTGAGTA TTTAGAAATT GCCGAGTTAA CAGAGCAAGA GGCAATTAAA AATAGTTTGA AAACTCAGGA AAATAGAGAC CCAAAACTTT ACATTGAGCT GTTAACGGAG TTGGGATCAC TTTATTATAA TCAAGGAAAA TATTTACAAG CATTTCGCTT AAAAAAAGCT CAAAGAAAAA TTGCGCATCA GTACGGACTT TTAGCTTTTA TTGGCGCATC TCAGTTACAA CCACAAAAAC AAAGTTATAT CAAAGAATCA TTAGATTACC AAAATACTTT ACCCTCAGAA ATAACTGCTT CTGGTCGTCA AAAAGATATT AATAATCTCC TGGAAAGAAT AAGTCGAAAT GACTGTAAAT TAACAATTAT TCATGGTCGT TCTGGTGTAG GAAAAAGTTC TTTAGTTAAT GCTGGATTAA TACCAGCTTT AAAAAATATT AGTATTTCAG CACGAGATAC AGTACTAGTA GCAGTACAAA GATATAATGA TTGGCTAGAA GTATTAGCAT ATTCTCTCAA TAAATCATTA CAAAAAAAAT GTAAGTTGCG AAATAATAAT AATCTCTTCA AACTCAAAAA AGATTATATA AAAAATCAAG AATCAATTTT TTCTATAAGA GGAAAAAATT TGAATTCAGA AGTAGAAAAA ACTTATGATT CTGAACTTAA AGATGAATTT CAGTGTATAG AATCATGTGT TATAGCTCAA TTAAAAAACA ATTCAGAGAA TAATTTATTA ACAGTAATAG TATTTGATCA ATTTGAAGAA TTTTTCTTTT TTAACAATAG TAGTGAAGAT AGAGAAGTTT TCTACAGATT TATATGTAAT TGTCTAAACC TACCCTTTGT GAAAGTAATC TTATCTATGA GAGAAGATTA TTTACATTAT TTATTAGAAT GGGACTTTAT CAGCGATCTA GATGTTATTA ATAATAATAT CTTAGATAAA GATATCCGTT ACCATTTAAG AGATTTTTCT AGAGAAGATG CTTATACTGT TATAGAATGT TTAACAAAGA GAGCTAAATT TAATTTAGAA CCTCAATTGA TTGATGTAAT TGTTGATGGT TTAGCAGATG AAAAACAGCA AATTCGCCCA ATAGAATTAC AAGTAGTAGG AAGTCAACTG CAAGAAGAAA AACCTCAGAT TCAAACTTTA GATCAATTTC AAAAAAAGTT TGACATTAAT CCAAAAAAAG CGAAAGCAAA ACTAATAAAA AATTTTTTAG AGCAAGTAAT TATAGATTGT GGTCAGGAAA ATGAAGAAGC TACTATGCAA GTTTTATTTG CACTAACTAA TGATAATTTA ACTAGAGCTA CTCGTACAAA AAAAGAGTTA TTAGAAATAG TAAAAACATG TATAGAAACA AGTTTTTTAG TAAATGTTGA TTCTAGTAAA TTTGTCGAAA ATCAAATTAA TTATAATGAA AAGATAGAAG GATTGCTAAA TTTAATTTTA GAAATATTAG TAGATTCAGG ATTATTATTT ATTCGGCAAG AATGCAATGA AAAAAACTAC CAGCTAGTTC ACGATTATCT AGTAAAACCA ATCCGTAAAA GGTTTGACTT AGAAAATAGA TTACAGCAGG CTGAGGTAGA GATAAAAAAT GCTGAAATTG CTAAAAACAA GGCAGAAACA GATAAAATAA CTAGCCAAGC AAAACTAAAT ATACTTTTAA AACGACAACT AGCAGTAGCA ATCCTGGGAA TTATATTAAT GTCAATGTCA ACTATTGCTA CACTGGGTTT TTGGCAGAAA ACAAGATTTC AAAAACAAGT AGCAACTGCT CAAAAAGAGC GTGCAGATAT TAATAGCATG ACTGCTTTTT CAGAAGCATT ATTTTTTTCA GGTTATAAAT TTGATGCTTT GATAGAAAGT ATTAAAGCAG GTAAAAAATG GCAAAAGATA AAACAATTAT TAGGAGAACA AAATCTCTCA AATGATACAG AATATCGAAT TGCAGCTTCT CTTCAGCAAG CAGTTTATGG AGTGAACAAA TATAACCATT TGGAAGGACA TAATAATATA GTTTGGAGTG TCATCTTTCA TCCTGAAGGA AACTTAATTG CTTCTGCTAG TGCAGATAAA ACTATTAAAT TATGGAGTCG AGATGGCAAA TTACAAAAAA CTCTAACAAA TCATAAAAAT AGGGTGAGCA AAATTAGCTT TAGTTCGGAT GGGAAATACT TGGCTTCAGC TTCCCATGAT TCCACAGTTA AAATTTGGGA TCTTCAGCAA CTAGAAATGA AACCTCTATC TCTCAAGAGT CATAGTGATT CGGTGGTAAC AATCAACTTT AGTCCGAATA ATAAAATGTT AGCATCAGGT TCACTTGACA AAACTATCAA AATTTGGAAC TATACGGGCG TATTACTTAG AACAATTAGG ACTAAATCAG TAGTTAAATG GGTTAGCTTT AGTCCAAATG GAAAAATGAT TGCTGCTGCT AATGCAAATG GAACTGTACA GCTGTGGAAT CTTAATGGGA AGCTTTTGAA AACCTTAAAA CATGGAGCTG GAAATCATAA TTACCCAGTT TACAGTGCCA ATTTTTCTCC TGACGGTAAG AGAATGGTGA CAGCAAGCGG AGATCAAACA GTCAAAATTT GGCGTTTTTT CAGAAATATA CCGATTTTAG AAAAAACAAT AACAGGACAC AAAAAACAAG TTATCAATGC CAGTTTTTCT CCTGATGGAA AAATAATAGC TTCCTCTAGT ACAGACAAAA CTATCAAAGT TTGGCAGCTA GACGGAACCC TCTTGAAAAC TTTTTCGGGT CATGGAGACA CAGTTACTCA GGTTACTTTC AGTCCTGATG GCGAAACTCT GGCTTCAGCT AGCTATGATA AAACTATTAA GTTCTGGAGT CTCAAAAACG ATTCTCTAAA TGTTCTACAA GGTCATAAAC ATAGAGTTCT TGGTGTGAGT TTCAGTCCAG ATGGTCAAAT CTTGGCTTCT GCATCTCAAG ACAATACTAT TAAATTGTGG AGTCCCACAG GTAAGTTATT AAATAATCTT GAGGGGCATA CTGATAGAGT AGCAAGTGTT AGTTTTAGCT CAGATGCTCA GATTCTTGCT TCTGGTAGTT ATGATAATAC AGTAAAGTTA TGGTACCTCA ATTCTCCAAA TCAAATCTGG AACTGGAAAT TCCTTGAAGA TCCTAAAAGT TGGCAATTGT TAGGCAAAAA TCATCAGCTT TTTACTCTCA AGAATGAAAA AAACAAGTTA TATTTAGTAG AACAGGTAAA GTTTTTAGAG AATTTTTTGT CAACTAATTT AAATTGTTTT CTAAATGCGA GGAGTTTTTG TCTTGTTCCC TGGGGAAAAA TTACTTCCTT CTTTCCTAGA AATTTTTCTT TACTGCCACG TCAGTTTCTT GAAGAACTAA AATACCAAAG TTGGTTTGAG ATCGCTGCCG ATAATCAAGT AAAAGTTCAA TGTAGACTTC TACAGTGCTT GCAAAATGAG ATCATAACTG TTGGTGTTGA TTGGAATTGG AACACAGATG ATTACTTGAT TGATTTTACC TCTAAAAGTA TTAATCTTAT AGGACATACT GATAGTTTGC TGAGTGTTAG CTTTAGTCCA AATAATCAAG TTATTGCTTC TAGTGGCAAA GACAAAACGA TAAGGTTGTG GAACCGGGAA GGTAAGCTGC TGAAAACTTT AGTTGGACAT AATGAATGGG TTAGTAGTGT CAGTTTTAGT CCTGATGGCA AAATACTCGC TTCTGCTAGC GATGATGGCA CCGTCAAACT ATGGACTCAA AAAGGTGTGC TTTTAAAAAC TATTAATGCT CATAGTGGTT GGGTTTTGGG GGTAAGTTTT AGTCCAAATG GTCAGGCGAT CGCTACAGCA AGTTATGATA ATACGGTTAA GCTTTGGAGT CTTGACGGTG AGTTGCTCAG AACTTTTTTG AAGGGTGCTA GCGATAGTGT TACCAGTGTG AGTTTTAGTC CGGATGGTCA GGCCATTGCT TCATCTAGTT ATGATGGTAA GGTTAAGCTC TGGAGTCTTT ATGATGGTAG TTTATTAAAA ACTTTGAACG GTCATCAGGA TAGTGTGATG AGTGTAAGTT TTAGTCCTGA TGGTAAGTTG TTAGCTTCTG GTAGTAGAGA TAAAACTGTA ATTTTGTGGG ATTTGGCTTT GGATAGTTTG TTAGATCAAG GTTGTAGTTG GGTTCGTGAT TATTTACGGA CTAACCCTCA TGTTTCTCAG AGTGATCGGC AACTTTGTGA AAAATAA
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Protein sequence | MEPLKYPEES IIYNKRSLTR LMRSVTISQG QFSLILACCN YQHFQQRMMM EVKKMLSVEL QEIVLSKTVT TLYTTIDQQL EKFPEAPAVM ILNLDKVEAI DELLISTNQV RDEFRKKFSF PLILWITDKL LAKLIRLAPD FKSWAAATIK FEFATSDLIH LLKMAIDSYW INESANEQQQ LIKSSSNSTK YNFLVPSFLD QSNCYYGKKL SQNKHQEIQL AFKDLKEREQ HLETTLKAKI EFIIGRDYFY NNNIDSALEH YQESLNLWEY KIGSLEYPKS SIISERFILE QKGIVLYNIA LCYYLQSTQN PLDNYQELEK AKLKLEESKQ LFEEVNNFVL VAEVITTLGQ AIKQMKAWGE LEAIALEGLQ LHHKYGNDLQ IAQDYGFLAE VALQKSNWVE AQKLSERALN ILFYAKDITL PTEKNKYLLL LAKSLKNLYR QAEAIEYLEI AELTEQEAIK NSLKTQENRD PKLYIELLTE LGSLYYNQGK YLQAFRLKKA QRKIAHQYGL LAFIGASQLQ PQKQSYIKES LDYQNTLPSE ITASGRQKDI NNLLERISRN DCKLTIIHGR SGVGKSSLVN AGLIPALKNI SISARDTVLV AVQRYNDWLE VLAYSLNKSL QKKCKLRNNN NLFKLKKDYI KNQESIFSIR GKNLNSEVEK TYDSELKDEF QCIESCVIAQ LKNNSENNLL TVIVFDQFEE FFFFNNSSED REVFYRFICN CLNLPFVKVI LSMREDYLHY LLEWDFISDL DVINNNILDK DIRYHLRDFS REDAYTVIEC LTKRAKFNLE PQLIDVIVDG LADEKQQIRP IELQVVGSQL QEEKPQIQTL DQFQKKFDIN PKKAKAKLIK NFLEQVIIDC GQENEEATMQ VLFALTNDNL TRATRTKKEL LEIVKTCIET SFLVNVDSSK FVENQINYNE KIEGLLNLIL EILVDSGLLF IRQECNEKNY QLVHDYLVKP IRKRFDLENR LQQAEVEIKN AEIAKNKAET DKITSQAKLN ILLKRQLAVA ILGIILMSMS TIATLGFWQK TRFQKQVATA QKERADINSM TAFSEALFFS GYKFDALIES IKAGKKWQKI KQLLGEQNLS NDTEYRIAAS LQQAVYGVNK YNHLEGHNNI VWSVIFHPEG NLIASASADK TIKLWSRDGK LQKTLTNHKN RVSKISFSSD GKYLASASHD STVKIWDLQQ LEMKPLSLKS HSDSVVTINF SPNNKMLASG SLDKTIKIWN YTGVLLRTIR TKSVVKWVSF SPNGKMIAAA NANGTVQLWN LNGKLLKTLK HGAGNHNYPV YSANFSPDGK RMVTASGDQT VKIWRFFRNI PILEKTITGH KKQVINASFS PDGKIIASSS TDKTIKVWQL DGTLLKTFSG HGDTVTQVTF SPDGETLASA SYDKTIKFWS LKNDSLNVLQ GHKHRVLGVS FSPDGQILAS ASQDNTIKLW SPTGKLLNNL EGHTDRVASV SFSSDAQILA SGSYDNTVKL WYLNSPNQIW NWKFLEDPKS WQLLGKNHQL FTLKNEKNKL YLVEQVKFLE NFLSTNLNCF LNARSFCLVP WGKITSFFPR NFSLLPRQFL EELKYQSWFE IAADNQVKVQ CRLLQCLQNE IITVGVDWNW NTDDYLIDFT SKSINLIGHT DSLLSVSFSP NNQVIASSGK DKTIRLWNRE GKLLKTLVGH NEWVSSVSFS PDGKILASAS DDGTVKLWTQ KGVLLKTINA HSGWVLGVSF SPNGQAIATA SYDNTVKLWS LDGELLRTFL KGASDSVTSV SFSPDGQAIA SSSYDGKVKL WSLYDGSLLK TLNGHQDSVM SVSFSPDGKL LASGSRDKTV ILWDLALDSL LDQGCSWVRD YLRTNPHVSQ SDRQLCEK
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