Gene Tery_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3770 
Symbol 
ID4243718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5792469 
End bp5793836 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content35% 
IMG OID638108707 
Producthypothetical protein 
Protein accessionYP_723291 
Protein GI113477230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00806133 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAGGTAA AAAAACTCTT GAGTAAATTA GACTTAATTA GATTTTATAA AGCTTGTAAT 
CCAAGCAAGA CCTTGATAGT AGGAAATGCA GAAGATCAGC AATATTATAT AGATTTTGCC
AGTGTTAGAG GTAGCGATAT AATTAAAGAA TTAGAAAGAA CTATAATACT ATTATCAGGA
AATCAGCCGA CTTGTCAACT ATTTACAGGC CACATAGGTT GTGGTAAGTC TACCGAATTA
TTTCGACTTA AAGATAAATT AGAAAAACAA GGATATCATG TTGTTTACTT TGAGTCTTCA
GAAGACTTAG ATATGGGAGA CGTAGATATT AGCGATATTT TGCTAGCGAT TGCTCGTCAA
GTCAGTGAAA GCATGGAACA AGCTAAAATT CAAATCAAAC CAAGTTACTT CCAAAAGTTA
TTTGGTGAAA TATCAGAACT GTTACAAACT CCCATAGAAC TTTCCGCAGA AGCAGAGCTA
TCTGTTGGTA TTGCTAAAAT TACTGCTAAA ACCAAAGATT CCCCTAAACT ACGTTCTCAG
TTAAGACAAT ACCTCGAACC CCGAACTAGC ACTATTCTAG AATCAATCAA TCAAGAATTA
TTAGAACGTA CCAATATAGA GCTCAAGAGA CGAGATAAAA AAGGACTTGT TGTGATTGTT
GATAATCTAG ACCGTGTAGA TAACTCACCC AAATCTTGGG GACGTACTCA ACCAGAATAT
TTATTTGTAG ACCGAGGCGA GCAACTCAAA AAACTCAACT GTCATGTCGT CTACACAATT
CCTCTTACAT TAATGTTCTC TAATGATTAT GGCAGATTAT CTAGTCGATT TGGAGTGAAA
CCAAAAATAT TACCAATGGT GCCTGTACAG ATTAGGTCTA AAAAACCGAC AATAGCCCCA
AATGACTATG AGACAGGAAT AAAATTATTA CGAGAAATGG TATTAGCTAG AGCTTTTCCA
GAAATACCAT CCCAAAAACG TCTAGAATTT ATTCCCGCTC TATTTGAAAC TTCAGAAACC
CTTGATAGAC TTTGTCGAGT TAGTGGGGGT CACATGCGAA AACTGTTAAT GTTGCTCTAT
AGTTGTCTGC AACAAGAAGA TCCTCCTTTT TCTAGTGAAT GTTTAGAAAA TGTGATTCAG
GAATATCGAG ATGATCTAAC TAGAGCTATT ACTGTTGACG AATGGGAGTT GCTATTTAAA
GTAGTACAAA ATCAAAGAGT AACAGGAGAA GAAGAATGCC AAGCTTTACT CAGAAGTATG
TTTGTTTTTG AATATCGAGA TCGGGATGGT CATTGGTTTG GAATTAATCC ATTGTTGGCA
GAAACTAAAA AATATGCTAG TTGGGTTAAT AGTAATTATC AGGAGTGA
 
Protein sequence
MEVKKLLSKL DLIRFYKACN PSKTLIVGNA EDQQYYIDFA SVRGSDIIKE LERTIILLSG 
NQPTCQLFTG HIGCGKSTEL FRLKDKLEKQ GYHVVYFESS EDLDMGDVDI SDILLAIARQ
VSESMEQAKI QIKPSYFQKL FGEISELLQT PIELSAEAEL SVGIAKITAK TKDSPKLRSQ
LRQYLEPRTS TILESINQEL LERTNIELKR RDKKGLVVIV DNLDRVDNSP KSWGRTQPEY
LFVDRGEQLK KLNCHVVYTI PLTLMFSNDY GRLSSRFGVK PKILPMVPVQ IRSKKPTIAP
NDYETGIKLL REMVLARAFP EIPSQKRLEF IPALFETSET LDRLCRVSGG HMRKLLMLLY
SCLQQEDPPF SSECLENVIQ EYRDDLTRAI TVDEWELLFK VVQNQRVTGE EECQALLRSM
FVFEYRDRDG HWFGINPLLA ETKKYASWVN SNYQE