Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3755 |
Symbol | |
ID | 4243703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5764286 |
End bp | 5766127 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638108696 |
Product | FtsH peptidase |
Protein accession | YP_723280 |
Protein GI | 113477219 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.916692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAATA AAAAGTGGAG AAACGCTGGC CTGTATGCCC TATTGGCAAT AGTGGTCATC GCTTTAGCAA CAGCATTCTT CGATCAACAA CCCCAAGCTC GCGAAACCTG GAAATACAGT CAGTTTATTC AGCAAGTAGA AAACAAAAAT GTAGAGAAAG TAGATATAAG CGCTGACCGG ACAGTAGCTA GAGTCAAAGT AGCTGACGGC AGTGTAGTCC GAGTTAATCT ACCTAATGAC CCGGACCTAA TTAACATACT CACTCAAAAC AATATAGATA TTTCAGTACT ACCTCAGAAT GAAGAAGGTT TCTGGGTCAG AGCATTAAGC AGTTTATTCT TCCCTATCCT ATTGTTGGTA GGATTGTTCT TCCTACTACG ACGGGCTCAA AGTGGACCTG GTAGTCAAGC GATGAACTTT GGCAAATCTA AAGCTAGAGT GCAAATGGAA CCTCAAACCC AAGTCACATT TAGCGATGTA GCAGGTATTG AACAGGCCAA ACTAGAACTA ACAGAAGTAG TAGACTTCCT CAAAAATGCC GATCGCTTCA CAGCAATAGG AGCCAAAATT CCTAAAGGTG TACTATTAGT AGGCCCTCCC GGAACAGGTA AAACTCTATT AGCTAAGGCT GTTGCTGGGG AAGCAGGAGT ACCATTCTTC TCCATCTCCG GCTCTGAATT TGTAGAAATG TTTGTAGGTG TAGGTGCTTC CCGGGTTCGA GACCTATTTG AACAGGCCAA GTCTAGTGCT CCCTGTATCG TATTTATAGA TGAAATAGAT GCAGTAGGTC GTCAAAGAGG TGCTGGTTTA GGTGGTGGTA ATGATGAAAG AGAACAAACT TTGAACCAGC TACTCACCGA GATGGATGGC TTTGAAGGAA ACACAGGTAT TATTATTATA GCTGCTACTA ACCGCCCTGA TGTTTTAGAC GCTGCCCTAC TCCGCCCTGG TCGTTTTGAC CGCCAGGTAG TAGTAGACCG CCCCGACTAT GCAGGTCGTC TTGAAATTCT CAACGTTCAT GCTCGTGGCA AAAGTCTCTC CAAAGATGTA GACTTAGAAA AAATTGCCCG TCGGACACCA GGGTTTACTG GTGCAGATTT ATCTAATCTA TTAAATGAGG GAGCTATTCT AGCAGCTCGT CGCAATTTAA CTGAAATTTC TATGGATGAA GTTAATGATT CCATTGATCG GGTATTGGCT GGCCCAGAAA AGAAAGATCG AGTAATGAGC GAGAAGCGTA AGGAGTTAGT GGCATATCAT GAGGCTGGTC ATGCTTTGGT TGGAGCTTTA ATGCCTGATT ATGACCCAGT ACAGAAGATT AGTATTATTC CTCGTGGTAG AGCTGGTGGT TTAACTTGGT TTACTCCTAG TGAAGACCGA ATGGACTCTG GTTTGTATTC TCGCGCTTAC CTACAAAATC AGATGGCTGT AGCTTTGGGT GGTCGTCTTG CTGAGGAAAT TGTTTTTGGT GATGAAGAGG TCACCACTGG AGCTTCTAAT GATTTGCAGC AAGTGGCTCG TGTGGCCCGC CAGATGGTAA CTAGGTTTGG AATGAGCGAT CGCCTCGGTC CTGTAGCTCT TGGTCGTCAG AACGGTAATA TGTTCTTAGG TAGAGATATT ATGTCTGAGC GTGATTTTTC TGAGGAAACT GCTGCTGCTA TTGATGATGA GGTTAGTAAT TTGGTAGACC AAGCTTATCG TCGTGCTAAA GAAGTTTTAG TAGGCAACCG TCATATTTTG GATAGGTTGG CAGAGATGTT GGTTGATAAG GAGACTGTTG ACTCTGATGA GTTACAGGAG TTGTTGGCAA CTAATGATGT GAAAATGGCA GCTTTAATTT AG
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Protein sequence | MNNKKWRNAG LYALLAIVVI ALATAFFDQQ PQARETWKYS QFIQQVENKN VEKVDISADR TVARVKVADG SVVRVNLPND PDLINILTQN NIDISVLPQN EEGFWVRALS SLFFPILLLV GLFFLLRRAQ SGPGSQAMNF GKSKARVQME PQTQVTFSDV AGIEQAKLEL TEVVDFLKNA DRFTAIGAKI PKGVLLVGPP GTGKTLLAKA VAGEAGVPFF SISGSEFVEM FVGVGASRVR DLFEQAKSSA PCIVFIDEID AVGRQRGAGL GGGNDEREQT LNQLLTEMDG FEGNTGIIII AATNRPDVLD AALLRPGRFD RQVVVDRPDY AGRLEILNVH ARGKSLSKDV DLEKIARRTP GFTGADLSNL LNEGAILAAR RNLTEISMDE VNDSIDRVLA GPEKKDRVMS EKRKELVAYH EAGHALVGAL MPDYDPVQKI SIIPRGRAGG LTWFTPSEDR MDSGLYSRAY LQNQMAVALG GRLAEEIVFG DEEVTTGASN DLQQVARVAR QMVTRFGMSD RLGPVALGRQ NGNMFLGRDI MSERDFSEET AAAIDDEVSN LVDQAYRRAK EVLVGNRHIL DRLAEMLVDK ETVDSDELQE LLATNDVKMA ALI
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