Gene Tery_3755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3755 
Symbol 
ID4243703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5764286 
End bp5766127 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content44% 
IMG OID638108696 
ProductFtsH peptidase 
Protein accessionYP_723280 
Protein GI113477219 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.916692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAATA AAAAGTGGAG AAACGCTGGC CTGTATGCCC TATTGGCAAT AGTGGTCATC 
GCTTTAGCAA CAGCATTCTT CGATCAACAA CCCCAAGCTC GCGAAACCTG GAAATACAGT
CAGTTTATTC AGCAAGTAGA AAACAAAAAT GTAGAGAAAG TAGATATAAG CGCTGACCGG
ACAGTAGCTA GAGTCAAAGT AGCTGACGGC AGTGTAGTCC GAGTTAATCT ACCTAATGAC
CCGGACCTAA TTAACATACT CACTCAAAAC AATATAGATA TTTCAGTACT ACCTCAGAAT
GAAGAAGGTT TCTGGGTCAG AGCATTAAGC AGTTTATTCT TCCCTATCCT ATTGTTGGTA
GGATTGTTCT TCCTACTACG ACGGGCTCAA AGTGGACCTG GTAGTCAAGC GATGAACTTT
GGCAAATCTA AAGCTAGAGT GCAAATGGAA CCTCAAACCC AAGTCACATT TAGCGATGTA
GCAGGTATTG AACAGGCCAA ACTAGAACTA ACAGAAGTAG TAGACTTCCT CAAAAATGCC
GATCGCTTCA CAGCAATAGG AGCCAAAATT CCTAAAGGTG TACTATTAGT AGGCCCTCCC
GGAACAGGTA AAACTCTATT AGCTAAGGCT GTTGCTGGGG AAGCAGGAGT ACCATTCTTC
TCCATCTCCG GCTCTGAATT TGTAGAAATG TTTGTAGGTG TAGGTGCTTC CCGGGTTCGA
GACCTATTTG AACAGGCCAA GTCTAGTGCT CCCTGTATCG TATTTATAGA TGAAATAGAT
GCAGTAGGTC GTCAAAGAGG TGCTGGTTTA GGTGGTGGTA ATGATGAAAG AGAACAAACT
TTGAACCAGC TACTCACCGA GATGGATGGC TTTGAAGGAA ACACAGGTAT TATTATTATA
GCTGCTACTA ACCGCCCTGA TGTTTTAGAC GCTGCCCTAC TCCGCCCTGG TCGTTTTGAC
CGCCAGGTAG TAGTAGACCG CCCCGACTAT GCAGGTCGTC TTGAAATTCT CAACGTTCAT
GCTCGTGGCA AAAGTCTCTC CAAAGATGTA GACTTAGAAA AAATTGCCCG TCGGACACCA
GGGTTTACTG GTGCAGATTT ATCTAATCTA TTAAATGAGG GAGCTATTCT AGCAGCTCGT
CGCAATTTAA CTGAAATTTC TATGGATGAA GTTAATGATT CCATTGATCG GGTATTGGCT
GGCCCAGAAA AGAAAGATCG AGTAATGAGC GAGAAGCGTA AGGAGTTAGT GGCATATCAT
GAGGCTGGTC ATGCTTTGGT TGGAGCTTTA ATGCCTGATT ATGACCCAGT ACAGAAGATT
AGTATTATTC CTCGTGGTAG AGCTGGTGGT TTAACTTGGT TTACTCCTAG TGAAGACCGA
ATGGACTCTG GTTTGTATTC TCGCGCTTAC CTACAAAATC AGATGGCTGT AGCTTTGGGT
GGTCGTCTTG CTGAGGAAAT TGTTTTTGGT GATGAAGAGG TCACCACTGG AGCTTCTAAT
GATTTGCAGC AAGTGGCTCG TGTGGCCCGC CAGATGGTAA CTAGGTTTGG AATGAGCGAT
CGCCTCGGTC CTGTAGCTCT TGGTCGTCAG AACGGTAATA TGTTCTTAGG TAGAGATATT
ATGTCTGAGC GTGATTTTTC TGAGGAAACT GCTGCTGCTA TTGATGATGA GGTTAGTAAT
TTGGTAGACC AAGCTTATCG TCGTGCTAAA GAAGTTTTAG TAGGCAACCG TCATATTTTG
GATAGGTTGG CAGAGATGTT GGTTGATAAG GAGACTGTTG ACTCTGATGA GTTACAGGAG
TTGTTGGCAA CTAATGATGT GAAAATGGCA GCTTTAATTT AG
 
Protein sequence
MNNKKWRNAG LYALLAIVVI ALATAFFDQQ PQARETWKYS QFIQQVENKN VEKVDISADR 
TVARVKVADG SVVRVNLPND PDLINILTQN NIDISVLPQN EEGFWVRALS SLFFPILLLV
GLFFLLRRAQ SGPGSQAMNF GKSKARVQME PQTQVTFSDV AGIEQAKLEL TEVVDFLKNA
DRFTAIGAKI PKGVLLVGPP GTGKTLLAKA VAGEAGVPFF SISGSEFVEM FVGVGASRVR
DLFEQAKSSA PCIVFIDEID AVGRQRGAGL GGGNDEREQT LNQLLTEMDG FEGNTGIIII
AATNRPDVLD AALLRPGRFD RQVVVDRPDY AGRLEILNVH ARGKSLSKDV DLEKIARRTP
GFTGADLSNL LNEGAILAAR RNLTEISMDE VNDSIDRVLA GPEKKDRVMS EKRKELVAYH
EAGHALVGAL MPDYDPVQKI SIIPRGRAGG LTWFTPSEDR MDSGLYSRAY LQNQMAVALG
GRLAEEIVFG DEEVTTGASN DLQQVARVAR QMVTRFGMSD RLGPVALGRQ NGNMFLGRDI
MSERDFSEET AAAIDDEVSN LVDQAYRRAK EVLVGNRHIL DRLAEMLVDK ETVDSDELQE
LLATNDVKMA ALI