| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3725 |
|---|
| Symbol | |
|---|
| ID | 4243901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5712913 |
|---|
| End bp | 5713839 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638108668 |
|---|
| Product | Beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_723254 |
|---|
| Protein GI | 113477193 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.646228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.35117 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACCTA TAATTTTTTC ACTCGCTGGA ACAATTTTAT CTGAGGCTGA AAAACAATTA
TTTACTCGCT CTCAACCTGC TGGTTTTATT CTATTTCAAC GCAACTGTGA ACACCCTACT
CAAGTTAAAC AATTAACTGA TACTTTGAGA AAATGTATTA ACCAAAAAGA CATTCCTATC
TTAATTGATC AAGAAGGAGG TCGAGTTGCT CGTTTACAGC CTCCCCATTG GTGGGTTGCA
CCTTCTGCTT CCTCTTATCT TCAAGAAATT AATGATCTTA ATGATGCTGC ACATAGAGCA
AAAATAGATG CTAAACACAT AGCTCAAGAT TTACAAAACA TTGGTATTAA TGTTAATTGT
TCTCCTGTAC TTGATTGTCC TATACCTGAA GCGGATCTAG TAATTGGTAC AAGAGCTTAT
AGTAATTCAC CTTCAGAAAT TATCACAATG GCTAAAGCTG TTATTGAAGG TTTTCAAGAG
GAAGGAGTTA TGCCTGTAAT TAAACACATC CCCGGTCATG GTCGTGCTTT AGTAGATAGT
CATAAAGCTT TACCAGTGGT TGAAACTTCT CTAAAAGAAT TATCTGAATG TGATTTTTTA
CCTTTTAAAG CTTTAGCAAA ATCTGTTACT TGGGCCATGA GCGCTCATGT TATTTATACT
GCTATTGATT CTGAAAATTG TGCTACTGTT TCACCTACTA TTATACAAGA AATTATCCGT
AAGCAAATTG GTTTTGAAGG TATATTAGTT ACTGATGACT TAACTATGAA GGCTTTATCA
GGAGATTTAG TTACGAAAGT TAATCGCTCA TTAAAAGCAG GTTGCGATTT AGCATTATAT
TGTGATGGCA AGTTAGAAGA TATGGAATTT TTAGCAGATA ATATTACTCC TGTAAAACCG
ATATTATTTA GTTCAAAAAT ATCTTAA
|
|---|
| Protein sequence | MLPIIFSLAG TILSEAEKQL FTRSQPAGFI LFQRNCEHPT QVKQLTDTLR KCINQKDIPI
LIDQEGGRVA RLQPPHWWVA PSASSYLQEI NDLNDAAHRA KIDAKHIAQD LQNIGINVNC
SPVLDCPIPE ADLVIGTRAY SNSPSEIITM AKAVIEGFQE EGVMPVIKHI PGHGRALVDS
HKALPVVETS LKELSECDFL PFKALAKSVT WAMSAHVIYT AIDSENCATV SPTIIQEIIR
KQIGFEGILV TDDLTMKALS GDLVTKVNRS LKAGCDLALY CDGKLEDMEF LADNITPVKP
ILFSSKIS
|
|---|
| |