| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3710 |
|---|
| Symbol | |
|---|
| ID | 4243886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5699408 |
|---|
| End bp | 5700592 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638108656 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_723242 |
|---|
| Protein GI | 113477181 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCA AATTTTTGCA AAAAGCTACA TCAAGAATAT TAGCACTAGG GATAGGAGTA
AGTGTAAATT TCACTAACTT TTCTGTTGTC AATGCTCAAA TAAGAGCAGA TAAAACTATA
AAAATTCGGT ACAAAAACCA AATAGAATCA ATATTTGTTC AGAGTATAGA AGAACAAACT
AATATTCGTG TTTATCAACA AACAAATCAA GCAGTAGTCT CCATAGATAC AGATAAAGCA
AACGGTAGTG GTACGATTAT TTCCCGCGAT GGAATGGTAC TAACTAATGC TCATGTCGTG
TCCCAAGGTG GTATTGTAAA AATCACTTTA GCAGATGGAA GAAAAGTTGA AGCAGATGTC
ATAGGTTTTG GTGAAAAAGG TTTAGACTTA GCAGTTCTAA AAATTAGAGG AGAAACAAAT
CTTCCTACCA TTAGGATAGC TAGCTCTGGT GATATAAAAG TAGGTCAGCG AGCTTTTGCT
ATAGGTAATC CTTTTGGTAG ATTTCAAGGT ACTCTTACTG TAGGAATAGT TAGTCGTATA
GATGAAGAAA GAGGTTTGAT TCAAACAGAT GCAGCTATTA ATCCTGGTAA CTCTGGGGGA
CCATTGTTAA ATAGTGCTGG AGAACTCATC GGTGTTAATA CTGCTATACT TACTCCTAGT
CAATTAGGGG GTAATATTGG TATTGGCTTT GCTATATCTA TAGATAAAGT CCCAGAGTTG
CTCAAGGCAG TTCGAGAAAG ACGAGCACCT TTAGTCGCTC AACATTCAAG AAGTAGGATG
TTTGATGAGG ACTTTGCTAA AAAATTAGAC TTTGATGCTT TAATTGAAGT TCAAGGCAAT
TTAGATGGAG AATCTAATGT ATTACCTGTA GATAATAGTT ACTATGATCT TTATGCTTTT
AAAGGTAGAG CAGGTCAAAA AATTTCTATT GATATGAGTA GTAATCAAAT AGATTCTTAC
TTGATTTTAT TAAACTCAGA AGATCAAGAA TTAGCTCAAG ATGATGATAG TGGGGAAGAC
AAAAATGCTA GGATTATAAT TATATTACCA AAGGATGGAA CTTATAAGTT ATTAGCAAAT
TCTTATGAAG CAGGAGAGTC AGGAAAGTAT GAGTTGAAAA TTGAAGCAAT TTCACCTAAA
ATGAGAATTT TATTTGAGCA AGAAAAGAGT AACTTTTATA GATAA
|
|---|
| Protein sequence | MKVKFLQKAT SRILALGIGV SVNFTNFSVV NAQIRADKTI KIRYKNQIES IFVQSIEEQT
NIRVYQQTNQ AVVSIDTDKA NGSGTIISRD GMVLTNAHVV SQGGIVKITL ADGRKVEADV
IGFGEKGLDL AVLKIRGETN LPTIRIASSG DIKVGQRAFA IGNPFGRFQG TLTVGIVSRI
DEERGLIQTD AAINPGNSGG PLLNSAGELI GVNTAILTPS QLGGNIGIGF AISIDKVPEL
LKAVRERRAP LVAQHSRSRM FDEDFAKKLD FDALIEVQGN LDGESNVLPV DNSYYDLYAF
KGRAGQKISI DMSSNQIDSY LILLNSEDQE LAQDDDSGED KNARIIIILP KDGTYKLLAN
SYEAGESGKY ELKIEAISPK MRILFEQEKS NFYR
|
|---|
| |