| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3694 |
|---|
| Symbol | |
|---|
| ID | 4243869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5672396 |
|---|
| End bp | 5674945 |
|---|
| Gene Length | 2550 bp |
|---|
| Protein Length | 849 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638108641 |
|---|
| Product | glycogen/starch/alpha-glucan phosphorylases |
|---|
| Protein accession | YP_723228 |
|---|
| Protein GI | 113477167 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.363758 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC CTGTAAATAA ATCTGTAAAC TCTACTACTA AAACTCAAAT TCAAATAGAA
GACGATCGCA CAGGCATGAG TGTCAAGACT CTGAGAAGGG CCTTAGCTGA TAATTTATTT
TATCTACAAG GGACTTATGA GTCAATGGCA AAAAAGGACG ATTTTTATCG TGCTTTAGCT
TATACTATAC GCGATCGCCT ACTCCAACGC TTTCTCTCTA CAATTCGTAC CTACAATGAG
AAAGATGTTA AAGTAGTATA CTACCTATCG GCCGAATTCC TCATGGGTCG TCACCTAGGT
AATAGTTTAA TTAACCTAGG CATATATGAA GAAATTCGTC AAGCCGTTAG CGAATCTGGA
TTGAACTTAG ATGAACTACT AGAACAAGAA GACGATCCAG GTTTAGGAAA CGGGGGTTTG
GGTAGGTTAG CAGCTTGTTT TTTGGACTCT CTAGCTACCC TAGAAATTCC CGCTATAGGT
CATGGTATTC GTTATGAATT CGGCATTTTC ACCCAAAACA TACAGGATGG GTGGCAAGCA
GAAATACCAG ATAAATGGCT GCGCTTTGGA AACCCCTGGG AAATAGCTCG TCCAGGAGAA
CAGGTAGAAG TCAAGTTTGG TGGCACCACA GAAGGATATC ATGATGAGAA AGGTAATTAT
CGGGTAACAT GGGTTCCAGC TCAAACTGTT GTGGGTATCC CCTATGACAC TCCCGTTCCT
GGCTATAAAG TCAATACAGT TAATCCCCTA CGTCTTTGGC GTGCAGAAGC CAGTGTAGAT
TTTAAGTTTG AAGAATTCAA TTCTGGAAAC TACGATGGTG CAGTAGCAGA AAAAATGAGT
TCAGAGACCA TATCAAAAGT ACTCTACCCG AATGACAACA CTCCCCAAGG TAAAGAACTT
CGGCTCAAAC AACAATATTT CTTTGTTTCC TGTGCTTTAC AAGATATTCT CCGCCGGCAT
TTATTGCACA ACCAAAACTT AGATAACTTA AGCGATAAAA CAGCAATTCA ATTAAATGAT
ACTCACCCTG CTGTTGCTAT TGTGGAAATG ATGCGGTTGT TCATAGATGA GTATGATATT
GACTGGGATC GTGCTTGGCA TATTACTCAA CATACTTTTG CCTATACTAA CCATACCTTA
TTACCAGAAG CGTTAGAACG GTGGGGGATC ACCTTGTTTG GTAGTTTGCT ACCTCGACAT
TTAGAGCTCA TCTATGAAAT TAATCGGCGC TTCATAGAGC AAGTACAAAC TTGGTATCCT
AAAGATAAAG AGTTAATCTC TCGTATATCT ATAATTGAGG AAAGCCCAGA AAAAGCAGTG
AGGATGGCTA ATTTAGCGAC TATAGGCAGT CATGCGGTCA ATGGGGTAGC AGCTCTACAC
ACAGAATTGC TCAAAAAAGG CGTACTTCAA GATTTCTACA AACTTTTCCC AGAAAAGTTC
ATGAATAAAA CTAATGGAGT AACCCCCCGT CGTTGGATTT TATTATGTAA TCCTAAACTT
TCGGCCTTAT TCTCTGAGAA ACTAGGAGAT AGTTGGTTAC GAAATTTAGA TCAACTCAAG
GAACTTGAAA AATATGTTGA TGATGTAGAA TTTTGTAAAC GTTGGCGACA AATTAAGCAG
GAAAATAAAG CTAAACTAGC AGAATACATT TTAAAACATA ATCGGATAGA AGTGGATACT
AATTCTCTGT TTGATATTCA AGTCAAACGT ATCCATGAGT ATAAACGCCA ACATTTGGAT
TTATTCCACA TCATTACTCT TTACAACCGC ATTAAGCAAA ATCCTAAGAT TAATATTCAA
CCTCGCACAT TCATTTTTGG TGGCAAGGCA GCTCCTGGTT ACTATATGGC TAAGTTAATT
ATTAAGTTGA CTAATGTTGT AGCTGATATA GTTAACAACG ACCCAGATGT GCACGGTCGT
TTGAAAGTAG TTTTCTTGGC TAACTTTAAT GCTTCATTAG GTCAGTTAAT TTATCCTGCT
GCTGATTTAT CCGAGCAAAT TTCTACTGCT GGCAAAGAAG CATCGGGAAC TGGTAATATG
AAGTTTGCCA TGAATGGAGC GATGACTATT GGTACTTTTG ATGGAGCTAA TATTGAGATT
CGAGAAGAGG TGGGAGCAGA AAACTTCTTC CTTTTTGGTC TAACTGCTGA AGAAGTTTTT
GATTTGAAGG CTAAGGGTTA TCAACCTTTA GATTACTATA ATACAAATTC AGAGTTAAAG
GCTGTGATTG ATCGAATTAC TAGTAGTCAG TTTAGCAAAG GTCATCCTAA TTTATTCAAG
CCTCTGATTA ACTCTATACT GTACAATGAT CAATATATGC TATTAGCTGA CTATCAGGCT
TATATTGAAT GTCAGGAAAA AGTTAGTCAA GTTTTCCAAG ACCCCAAAAA ATGGACAAAA
ATGTCTATTT ATAATTCTGT TCGCATGGGT AAATTTTCTT CTGACCGTAC AATTCTTGAG
TACGCGAAAG AAATTTGGGG AGCAACACCA GTTAAGATTA ATCAAGGAAA ATATAATCAA
AATGATGCTG GTTTGAAAGT AGATAATTAA
|
|---|
| Protein sequence | MNKPVNKSVN STTKTQIQIE DDRTGMSVKT LRRALADNLF YLQGTYESMA KKDDFYRALA
YTIRDRLLQR FLSTIRTYNE KDVKVVYYLS AEFLMGRHLG NSLINLGIYE EIRQAVSESG
LNLDELLEQE DDPGLGNGGL GRLAACFLDS LATLEIPAIG HGIRYEFGIF TQNIQDGWQA
EIPDKWLRFG NPWEIARPGE QVEVKFGGTT EGYHDEKGNY RVTWVPAQTV VGIPYDTPVP
GYKVNTVNPL RLWRAEASVD FKFEEFNSGN YDGAVAEKMS SETISKVLYP NDNTPQGKEL
RLKQQYFFVS CALQDILRRH LLHNQNLDNL SDKTAIQLND THPAVAIVEM MRLFIDEYDI
DWDRAWHITQ HTFAYTNHTL LPEALERWGI TLFGSLLPRH LELIYEINRR FIEQVQTWYP
KDKELISRIS IIEESPEKAV RMANLATIGS HAVNGVAALH TELLKKGVLQ DFYKLFPEKF
MNKTNGVTPR RWILLCNPKL SALFSEKLGD SWLRNLDQLK ELEKYVDDVE FCKRWRQIKQ
ENKAKLAEYI LKHNRIEVDT NSLFDIQVKR IHEYKRQHLD LFHIITLYNR IKQNPKINIQ
PRTFIFGGKA APGYYMAKLI IKLTNVVADI VNNDPDVHGR LKVVFLANFN ASLGQLIYPA
ADLSEQISTA GKEASGTGNM KFAMNGAMTI GTFDGANIEI REEVGAENFF LFGLTAEEVF
DLKAKGYQPL DYYNTNSELK AVIDRITSSQ FSKGHPNLFK PLINSILYND QYMLLADYQA
YIECQEKVSQ VFQDPKKWTK MSIYNSVRMG KFSSDRTILE YAKEIWGATP VKINQGKYNQ
NDAGLKVDN
|
|---|
| |