| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3688 |
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| Symbol | avtA |
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| ID | 4243995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 5662843 |
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| End bp | 5664108 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108635 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_723222 |
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| Protein GI | 113477161 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAATC CTGCCTTGAG TCAATTTGGT ACAACAATGT CCCGCCTGAC AGGTGTGCGG
GCTATTATGG CAGATATTAT TGCCACCCTA CGGGGGGGTC AAGGTCAGGA ATTTCTTGAC
TTCAGTTCTG GAAACCCGCT TGTTTTACCA GAAGTAGAAA AATTATGGAA AGACTGTACC
ACAGAATTAT TGGCAAGTCC AGAGTATGGG GAAGTAGTAG GACGCTATGG TTCTTCTCAA
GGTTATCAAC CTTTTATTGA TGCCGTTGTT AATGACTTTA ATTCTCGGTA TGGGTTGAGT
TTGAGCGATC GCAATGTTTT GATTACTCCT GGTTCTCAGT CTATATATTT CTATGCTGCT
AATGCTTTTG GAGGATATAC TGACAACCAA ACTCTGAAAA AAATTGTTCT ACCCCTTAGC
CCAGACTACA CTGGTTATGG TGGAGTTAGT TTAATTCCAG AGGCAGTAGT TGCCTACAAA
CCAACTCTGG AAATTGATGA TGAGGATCAT CGCTTCAAAT ATTGTCCCGA CTTTAGTCAA
CTCGTCATTG ATGAAAATAC TGGTTGTGTT ATTTTCTCAC GCCCCTGTAA CCCCACTGGT
AATGTCATTA GTGTTGATGA GGTCAAAAAA ATTGCCCATC AAGCCAATGT TTATGGTGTG
CCAGTATTGG TGGATGCGGC TTATGCTCCT CCCTATCCAG GATTAAATTT TGTCGACATG
GAACCTGTTT TTGGGGACAA TATTGTTCAT TGTATGAGTT TATCAAAGGC TGGACTTCCA
GGAGAACGAA TTGGCATTGC TATTGGAGAT GAAAGAATAA TTGAGGTTTT GCAAGGGTTT
CAGACTAATA TGTGTATTCA TTCTCCTCGT TATGGACAGG CGATCGCTAC TGATGCAATT
AATTCTGGGG CTCTGGCAGA AATTTCTACT AAAGTAATTC GGCCTTTTTA TCAAAATAAA
TTTTCGATTT TAGAATCAAC TTTAGAAAAA GCTTTACCAA AAAATTTGCC CTGGTTTCTC
CATCGTTTTG AAGGAGCTAT TTTTGCTTGG TTGTGGTTAA AAGATTTACC AATGACTGAC
TGGGAATTTT ACCAAAAGTT GAAGGAAGTA GGAATTATTG TTGTGCCTGG TAGTTCATTT
TTCCCTGGTT TACGAGAAGA ATGGCCTCAT AAACAACAGT GTATTCGTAT TAGTTTAACA
GCTCCCGATG AGCATATTCA AGAGGGAATG GAACGCTTGG CAAAGATGAT AATTTCAATT
TTTTAA
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| Protein sequence | MINPALSQFG TTMSRLTGVR AIMADIIATL RGGQGQEFLD FSSGNPLVLP EVEKLWKDCT
TELLASPEYG EVVGRYGSSQ GYQPFIDAVV NDFNSRYGLS LSDRNVLITP GSQSIYFYAA
NAFGGYTDNQ TLKKIVLPLS PDYTGYGGVS LIPEAVVAYK PTLEIDDEDH RFKYCPDFSQ
LVIDENTGCV IFSRPCNPTG NVISVDEVKK IAHQANVYGV PVLVDAAYAP PYPGLNFVDM
EPVFGDNIVH CMSLSKAGLP GERIGIAIGD ERIIEVLQGF QTNMCIHSPR YGQAIATDAI
NSGALAEIST KVIRPFYQNK FSILESTLEK ALPKNLPWFL HRFEGAIFAW LWLKDLPMTD
WEFYQKLKEV GIIVVPGSSF FPGLREEWPH KQQCIRISLT APDEHIQEGM ERLAKMIISI
F
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