Gene Tery_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3626 
Symbol 
ID4244144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5574671 
End bp5575789 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content34% 
IMG OID638108581 
Productcalcium/cation antiporter 
Protein accessionYP_723169 
Protein GI113477108 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.319673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAACG CACAAACAAT AATTTCAATT TTATTAGTAT TTGTTCCTAT TTCAATAGCT 
GCTAATGCTA TGGAATTGGG TTCATCAGTA ATTTTTATTA CATCTGCTAT AGCAATTATT
CCTTTGGCAG GTTGGATGGG TACAGCAACG GAAGAAATTG CAGTCGTTCT AGGTCCTAAC
TTAGGTGGTT TATTAAATGC TACATTTGGT AATGCTACAG AATTAATTAT CGGTATTATT
GCTTTAAATG CTGGTTTAGT AAGGGTAGTT AAAGCAAGCA TTACCGGTTC TATAATTGGT
AACTTATTGT TAGTAATGGG CCTCTCAATG TTTTTAGGTG GACTCCGTTT CAAAGAACAA
AAATTTCAGT CAGTAGTAGC TCGCTTAAAT GCTTCAGCAA TGAATTTAGC TGTAATTGCT
ATTCTAGTAC CAACAGCAGT GAATGCTACT TCCAATGGTA TTAGTAGTAA TACAATGCAA
AATTTGTCTG TCGCAGTAGG AATAGTATTA ATTACTGTTT ATATACTTAC CTTACTATTT
TCCATGAAAA CTCACTCTTA CTTATATGAA GTTGGTATAG TAGGAAGTGA ATCACAGGAT
TTAGATTCTG ATAGTGAATC AGAAGAAAAT GCCGAACATA AACCTAATTT GTTACTGTGG
ATTTTAGTGT TATTAATAGC AACTTTAACA GTAGCATTTG AATCAGAATT ATTGGTTGAT
TCTTTAGAAG AAGCTACTTC TGCATTAGGA TTAACTGCTT TATTTACTGG TGTAATTGTA
GTACCAATTA TTGGTAATGC TGCCGAACAC GCTACAGCAG TAACTGTTGC CATGAAAAAT
AAAATGGATT TATCTGTAAG TGTAGCAGTT GGCTCTAGTT TACAAATTGC GTTATTTGTG
GCACCTGTAT TAATTCTGAC TGGTTCATTG CTAGGTCAAC CAATGGATTT GAATTTTAAT
CCTTTTGAAT TAGTAGCAGT AGTAGTAGCA GTATTAATTG CTAATTCTGT CAGTTCTGAT
GGTCGTTCTG ACTGGTTAGA AGGGGTTTTA TTATTAGCAG CTTATACTAT TTTAGGACTG
GCCTTTTATT TTCACCCTGT AATTAAAGGA TTGAGTTAG
 
Protein sequence
MLNAQTIISI LLVFVPISIA ANAMELGSSV IFITSAIAII PLAGWMGTAT EEIAVVLGPN 
LGGLLNATFG NATELIIGII ALNAGLVRVV KASITGSIIG NLLLVMGLSM FLGGLRFKEQ
KFQSVVARLN ASAMNLAVIA ILVPTAVNAT SNGISSNTMQ NLSVAVGIVL ITVYILTLLF
SMKTHSYLYE VGIVGSESQD LDSDSESEEN AEHKPNLLLW ILVLLIATLT VAFESELLVD
SLEEATSALG LTALFTGVIV VPIIGNAAEH ATAVTVAMKN KMDLSVSVAV GSSLQIALFV
APVLILTGSL LGQPMDLNFN PFELVAVVVA VLIANSVSSD GRSDWLEGVL LLAAYTILGL
AFYFHPVIKG LS