Gene Tery_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3580 
Symbol 
ID4244213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5508138 
End bp5508824 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content33% 
IMG OID638108546 
Producthypothetical protein 
Protein accessionYP_723135 
Protein GI113477074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTTG GCTATGGTAA CAATACATCA TTCTTAAATC AACTAGAGAA AAGAAGTTTA 
ACTTATATAG GAGGATTAGC TAAAAATCGA AAAGTCATCA TTAAAAAACA AGATGACATT
AAAGAGGAAA TTAGATTAGA CAAGCTGGCA GAAAGTATAC CTCAGAAAGC TTTCAACTTA
GTTCAACTAA GTACAAAAAA TGCTAGAGAA GTTTGGGTAG CTACATTAGA AGTAGAAATA
TCTAGGATGT CAGGTCAAAA AACTATAGCT ATCGTTATGA ATGCTAAAAG TTTTTCTGAG
GCCACTGATA TTAACTATTA TATCACTAAT AGAGAAGACA AATATGTAAC TCCTGAGTGG
ATATATTCTA CTTATTCTCA AAGAAATTGG GTGGAAGTTT TCTACAGGGA AGCCAAAGGA
TGGTTAGGAT TAAGAGAATA TCAAGTCAGA GATAAAATCA GCCTTAAAAG GCATTTTATT
TTAGTATTTT GTGCTTATAC ATTTATTATC TGGCATCAGT TAACAGGAGG TATAAGAAGG
CGTTGGGCTA ACAAACCATT AAATACGTTT ACTGATACTT TAGAAGCATT TTGTACCGCA
ATATCTTATC GTTTTGTTGA GTGGTTAGAT GAAAACATCG AGGTATTTAC CGCTCATAAA
GAGAGTTTAG GGTTTGTTTG GGCTTGA
 
Protein sequence
MKFGYGNNTS FLNQLEKRSL TYIGGLAKNR KVIIKKQDDI KEEIRLDKLA ESIPQKAFNL 
VQLSTKNARE VWVATLEVEI SRMSGQKTIA IVMNAKSFSE ATDINYYITN REDKYVTPEW
IYSTYSQRNW VEVFYREAKG WLGLREYQVR DKISLKRHFI LVFCAYTFII WHQLTGGIRR
RWANKPLNTF TDTLEAFCTA ISYRFVEWLD ENIEVFTAHK ESLGFVWA