Gene Tery_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3549 
Symbol 
ID4244298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5469111 
End bp5469746 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content32% 
IMG OID638108519 
Productlipase, class 2 
Protein accessionYP_723108 
Protein GI113477047 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.719928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTT TAAACAAACC TAATCCAGTA TTGTTAATCC ATGGAATTTT TGACACTATA 
AAAATATTTG ATAAAATGTC TCGATACCTA AAAAAATTAG GATGGGAAGT ATACTCTGTG
AACTTAATTC CTAATTACGG TATTTTAGGT TTAGATAAAT TAGCCGAACA AGTAGCGAAT
TATGTAGATA AAACATTTCC ACCTAATCAA CCTTTTGATT TAATAGGTTT TAGTATGGGA
GGAATAGTAA GTCGTTATTA TGTTCAAAGA TTAGGAGGTA TTGATAAAAT AGAACGTTTT
ATCACTATTT CTTCTCCTCA CAATGGCACA TTAACAGGTT ACGTTTTAGG TTTACCAGCA
CCAATTCAAA TGCGTCCTAA AAGTTATTTT TTGCAAGATA TAAACCAGGA TATTGCTTTG
TTAGATCGGA TAAATTTTAC CTCAATTTGG ACTCCTTATG ATGCGATGAT TTTACCGGCT
AGAAGTTCTC AATTACCAGT AGGTCGAGAT ATCAAAATAG ATGTTTTATT TCATGCTTGG
ATGGTATCAT CTGGAAAGGT TTTAAAAGTA ATTTCTGAGG AACTGAAAGC AGAGCCTAAG
TCAAAACTAA CTATGAGTTT TTACGATAGA AGTTAA
 
Protein sequence
MESLNKPNPV LLIHGIFDTI KIFDKMSRYL KKLGWEVYSV NLIPNYGILG LDKLAEQVAN 
YVDKTFPPNQ PFDLIGFSMG GIVSRYYVQR LGGIDKIERF ITISSPHNGT LTGYVLGLPA
PIQMRPKSYF LQDINQDIAL LDRINFTSIW TPYDAMILPA RSSQLPVGRD IKIDVLFHAW
MVSSGKVLKV ISEELKAEPK SKLTMSFYDR S