Gene Tery_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3539 
Symbol 
ID4244288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5453262 
End bp5454149 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content36% 
IMG OID638108510 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_723099 
Protein GI113477038 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.271806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA TTACCCCAAA ACATTCTGAA TCTATCGTTA ACCTGAAAAG AAATCCTACA 
AGGCCAAGGG AAATATTTAA TAAAGTGATG ACAGGATTAT CAGGTGCTTG CATAGTTATC
ACTCTTATCC CTCTATTTGC AGTATTAACC TATGTTTTTA TCAAAGGATT AGCTCGTTTA
AACTTAGATT TATTTACTAA GTTACCTCCA ACAGCAGGTC AAGAAACAGG GGGTATTGCT
AATGCAATAC TCGGCACAAT TATGGTAGTA GCAATTGCTA GTTTAATTGC TGTACCTTTT
GGTATCTTAA CAGCAGTTTA TTTATCAGAA TTTAGTAACG AAAGAAATGC TCGTCCAATT
CGATTTGCTA CTAATATTTT GAGCGGTGTC CCATCAATTA TTGCTGGGGT ATTTGCCTAT
AGTTTACTAG TTTTATCTAT GGGTAAGTTT TCAGCCTTTG CCGGGGGATT TGCTTTATCT
GTTTTGATGT TACCTACTAT TATTAAAGCT ACTGATGAAG CTTTGCAAAT AGTTCCTAGA
GATATTAGAG CAGCATCCCT AGGAGTTGGT GCTTCTAATT ATCAGACTGT TCTACAGATA
GTTTTACCCA CTGCTTTTCC CAGTATTATC ACAGGTATAA CTCTTTCTAT TGCTCGTGCT
GCTGGAGAAA CAGCTCCACT ACTTTTTACT GTGATTTATT CTAATAATTG GCCTCGTAGT
CCCTTTGCTC CCACGTTACC ATCTTTGTCA TATCTAGTAT ATGACTTTGC CCGCAGTTTT
GATGTGGTTT TACAAGAATT TGCTTGGGCA GGTTCCTTGG TTTTAGTTTT ATTAGTTTTA
ATTACCAGTA TTCTTTCTCG TTGGGTAACG AGTAAAAAGC AATTTTGA
 
Protein sequence
MADITPKHSE SIVNLKRNPT RPREIFNKVM TGLSGACIVI TLIPLFAVLT YVFIKGLARL 
NLDLFTKLPP TAGQETGGIA NAILGTIMVV AIASLIAVPF GILTAVYLSE FSNERNARPI
RFATNILSGV PSIIAGVFAY SLLVLSMGKF SAFAGGFALS VLMLPTIIKA TDEALQIVPR
DIRAASLGVG ASNYQTVLQI VLPTAFPSII TGITLSIARA AGETAPLLFT VIYSNNWPRS
PFAPTLPSLS YLVYDFARSF DVVLQEFAWA GSLVLVLLVL ITSILSRWVT SKKQF