Gene Tery_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3538 
Symbol 
ID4244287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5452205 
End bp5453191 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content34% 
IMG OID638108509 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_723098 
Protein GI113477037 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.590785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCA AAGACATAAA CAATCTCAAA TTAAACAAAG ATATTCGCTC TCGGAGTAAT 
ATAGAAAAAA GACTTGATTA TGGTTTTATT AATCTAACTA AAGTTTTTGC TTGGAGCATA
GCAGTTCTTC TCATATTAAT GGCTCTAACA GTAGTTTGGC AAGCAATACC ATCTTTGAAT
GAATTCGGTT TTAGCTTTCT ATTTAAAAGT GTTTGGAATC CTGTTGCTAA TGATGGTAAA
GGTGATTATG GCGCATTGCC AATGATTGTT GGAACTATAT TTAGTTCATT ATTAGCTCTG
CTTATTGCAG TTCCTCTTGG TCTGGGTACA GCAATATTTT TAAGTGAGAA TTTTATCCCC
AAAAAAATTA TTACCCCATT AACTTTTATG GTGGAATTAT TAGCAGCTAT TCCGAGTGTA
GTTTATGGTT TATGGGGTAT TTATATTTTA ATCCCTTTTA TGAAGCCAAT AGAAATTTTT
CTGGGTAAAT ATCTGGGGTG GATTCCAATT TTTTCTATTC CTGACAATAT TAGTGCAGGA
GGTCCGGGAA TGTTTCCCGC AGCAATTATT TTATCAATAA TGATTTTACC AATTATTACT
GCAATTTCTC GCGATTCTCT TGCTAGTCTA CCACCTAATT TGCGACAAGC TTCTTTAGGT
TTAGGAGCTA GCCGTTGGTT TACTATTATT AGAGTATTAA TTCCAGCAGC TTTTTCAGGA
ATTGTTGGTG GTGTAATGTT AGCTTTGGGT AGAGCAATGG GAGAAACTAT GGCTGTCACA
ATGTTAATTG GTAATTCTAA CTCAATTAAC ATTAGCCTTT TTGCTCCAGC TAATACTATT
GCCTCTTTAA TGGCAAATCA ATTTGGTGAA GCTTCCGGCT TACAACGTTC TGCTTTGATG
TATACAGGGG TTATTCTGTT TGCTTTGACC CTAATTGTTA ATGTATTAGC TAATTGGATT
GTAAATCAAA TTAAGGTTAA GTATTAA
 
Protein sequence
MLPKDINNLK LNKDIRSRSN IEKRLDYGFI NLTKVFAWSI AVLLILMALT VVWQAIPSLN 
EFGFSFLFKS VWNPVANDGK GDYGALPMIV GTIFSSLLAL LIAVPLGLGT AIFLSENFIP
KKIITPLTFM VELLAAIPSV VYGLWGIYIL IPFMKPIEIF LGKYLGWIPI FSIPDNISAG
GPGMFPAAII LSIMILPIIT AISRDSLASL PPNLRQASLG LGASRWFTII RVLIPAAFSG
IVGGVMLALG RAMGETMAVT MLIGNSNSIN ISLFAPANTI ASLMANQFGE ASGLQRSALM
YTGVILFALT LIVNVLANWI VNQIKVKY