Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3524 |
Symbol | |
ID | 4244350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5429727 |
End bp | 5432135 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638108497 |
Product | hypothetical protein |
Protein accession | YP_723086 |
Protein GI | 113477025 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.316986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGTAC CTTTACTTCC ATTTGTTACT ACTACCGGAG CTGCCGTATG GAATAGCTGT GTTAATGCCT TTAATTTGGC ATTCGGTAGA ACTATGCCAA AAAATTTAGA AGGACAACAA CTAGCTCATC AAAAAGAATT ACAAGAAAAA CAAATAGTTG CTCAATTTGA GATTAAATAT ATGCGTACTA TATCTCAGAT TAAGTTACAA CACAATCATC CAGAATTTCA ACAAAGACTC GAAGTTGCTC GTAAAGAATT TCAAGCTAAA ATTGCTGAGT ACCAATACCA AAAAAATCGG CAACTTCAAG ATTTTATTAA AATAGTAAAT ATGCAAATAG CTAATAGTAA CAAAGAATTT AAAACCTGGC TATTTAAACA ACAAAAAAAA GTCCAAATTG AACTATCTCA ATATAATCGA GAAACCCAAT ATTTGAACGC AGCATATCAA CGGGAAATTG CCCTAGAAAT CAAAGAATTA GAAAACTGGC CGCTCAAAAA TTATCCCTGG CAAATACTCC AATATCATCA AGACAGAAAT CCTATTCCTA TACAAATAAT ACTTGCACCT CCAGAGGTAA ATTATGATCG TTTTCAGAGT ATCAATTCAA CTTCTAAACC AGAATTTCCT CAAGTAGAAA AACGTCTTTC TCAATACTTA AAAAACTTCC TACAAAAATA TTATCCTGTA GAAAACCAAC AAAGACCAAC GGAGCTAATA GACCATGCTT GGGAGAGTAA TCGTTTTGCT GGAGGTAGCG CGGTAAAAAC TATATTTAGT CGGTTAAAGT CGGAACCAAT AGTATTAATA GAATCAGAAG TAGATGGAGG ATTTATTAAT ATTCAACTTG CCTATTGGAG TGGTGGGCAA GAAGTTTCTC CTTTCTACAA AACTATAATT TCTCATTTGC ATTATCCGAA AATTATCTAT GCATTTGCTA TTCAACGTGC CTTACATTGG GAAGCAAATG TTAAACAGAA ACTCCTGGCA CAAGGGGTAA ATGAACAAGA AATAGATCAA GAATATGGAG GAGATAATCT GTTAAATTTG CAGATTTACA GAAAATATGA ACAAGACAAA CTAGCTGGAA TAGAGTTTGA ACGTCAATAC AAAACTAATC AGGAGGATTT TGACAAGTTA TCAGCTTTGT TGGGAGCATA TCATAATATT ATTGTTGCTC TATTTACTGA TATCCATTAC TTAATTCATA CTAATTTATC ACCTAAATTG CCAGAGTTAT TGGCAGAGCT AGAAACAGAG TTTTCGGTGG ATAAACGTCT GGGAGAAGAC TTATTTAAAA TGGTGGTTGA AAGTTATATT GGCAGTCTCA GAGCGATGGA ACAAGACCGC TCTGAGTTAG TACCAGAATT TGCTGTTGAT ATTGCTCTTG GTTTGGCTCG TTTATCTAAT CCTATTTGGG CAGAACAAAT GTTAGATTTT GCTTTAGAGT CTTGGCTAAA TTCCCGCTAT CTTTTCCCTA AGAACGGCAA AGAAAAATTT GATCTAGTTA CTGAAAATTT ACTACCTCTG GATCAGGAAT TTATGACTAA AGTTAATCGC TGCATGGTTG ATTTGGCTGA AGATAAAAAG GAGAGCCTAT CTGATAATGT TACTAACAGC ATTACTGAAG TTCCTATTCT GGAAATTCCC CCGAAAGCCC TGGAACTTCC TAGCCAAAAA ATTGAAGACT TGGGCAATGG TATTGAGTTG GAAATGATTT ATGTTCCTGG GGGAAGTTTT CTAATGGGAT CGCCGAAAGA TGAAGAGGCA AGAAATTCTA ATGAAAGTCC ACAACATGAA GTAATTCTTC AAGCCTTTTA TATGAGTAAA TATCCTATTA CTCAAAATCA GTATCAAGCT ATTATGGGAA ATAATCCTTC TAGTTTTGAA GGAGAAAGTC GTCCAGTAGA ATATGTGAAC TGGTATGATG CTACGGAGTT TTGTCAAAAA CTATCATCAA AAACTGGGGA CGTTTATGTG CTGCCGAGTG AGAGTCAGTG GGAATATGCC TGTCGTGCTG GTACAGTTAC TCCTTTCTAT TTTCAAGATA CTATAACGTC TGAGTTAGTT AACTATAATG CTAACCATCC TTATGGCGAT GCTCCTAAAG GAGAATATCG GCAAGAAACA ACTGATGTAG GAATTTTTCC ACCTAATGCA TTTGGTTTAT ACGATATGCA CGGCAATATC TCGGAATGGT GTCAGGATGT TTGGCATAAT AGTTACAAGG GAGCGCCTAT CGACGGAAGT GCTTGGGAAA GTGGGCGAAG CAATAGTTAT CGACTGCTCC GTGGTGGTAA CTGGTCTGAC GGTTCTAGGT ATTGCCGGAG TGCTGGGCGT GTTTATGCCC ATGCCGATAT CCGTAGTAAT GGTAAGGGTT TTCGAATTAT CTTGTCGCTC AAAAGTTAA
|
Protein sequence | MAVPLLPFVT TTGAAVWNSC VNAFNLAFGR TMPKNLEGQQ LAHQKELQEK QIVAQFEIKY MRTISQIKLQ HNHPEFQQRL EVARKEFQAK IAEYQYQKNR QLQDFIKIVN MQIANSNKEF KTWLFKQQKK VQIELSQYNR ETQYLNAAYQ REIALEIKEL ENWPLKNYPW QILQYHQDRN PIPIQIILAP PEVNYDRFQS INSTSKPEFP QVEKRLSQYL KNFLQKYYPV ENQQRPTELI DHAWESNRFA GGSAVKTIFS RLKSEPIVLI ESEVDGGFIN IQLAYWSGGQ EVSPFYKTII SHLHYPKIIY AFAIQRALHW EANVKQKLLA QGVNEQEIDQ EYGGDNLLNL QIYRKYEQDK LAGIEFERQY KTNQEDFDKL SALLGAYHNI IVALFTDIHY LIHTNLSPKL PELLAELETE FSVDKRLGED LFKMVVESYI GSLRAMEQDR SELVPEFAVD IALGLARLSN PIWAEQMLDF ALESWLNSRY LFPKNGKEKF DLVTENLLPL DQEFMTKVNR CMVDLAEDKK ESLSDNVTNS ITEVPILEIP PKALELPSQK IEDLGNGIEL EMIYVPGGSF LMGSPKDEEA RNSNESPQHE VILQAFYMSK YPITQNQYQA IMGNNPSSFE GESRPVEYVN WYDATEFCQK LSSKTGDVYV LPSESQWEYA CRAGTVTPFY FQDTITSELV NYNANHPYGD APKGEYRQET TDVGIFPPNA FGLYDMHGNI SEWCQDVWHN SYKGAPIDGS AWESGRSNSY RLLRGGNWSD GSRYCRSAGR VYAHADIRSN GKGFRIILSL KS
|
| |