| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3477 |
|---|
| Symbol | |
|---|
| ID | 4244477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5355116 |
|---|
| End bp | 5356810 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638108451 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_723040 |
|---|
| Protein GI | 113476979 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAACA AAATATTAAC AAAGAAAAAC TTACATTCTC ATATAGATTT ACTGCTAACG
CTAGGCTTAT TGCTAGCAGC AGTAGTACTT TTTTCTACTA ATTTAGGAAC ATTGCCTTTA
CGAGACTGGG ATGAAGGAAT AGTTGCCCAA GTAGCCAGAG AAATCAGCCG AGACAAGTGG
AATTGGCTTT ATCCTACTAT CAATAATACT CCTTATTTTA ATAAACCACC ATTGATACAT
TGGTTGATCG CTTTTATCTA TAGTATTGCA GGAGTCAATG AATTCAATGC CCGTTTATTT
CCCGCTTTGT TAACAGCATT TTCTGTACCT TTAATCTATG GTATTAGTCG AGAATTATTT
CACCCACGCA CTCCGGCAAT TTTTACCGCT TTGGTTTACT TAACTTTACT CCCTGTAGTG
CGACATGGGC GTTTAGCAAT GTTAGATGGT GCAGTAGTTT GTTTTTTTTT ATTAATGATT
TGGTGCGTAT TGCGCTCACG GCAAAACCTC CGCTATTCTC TCCCTATTGG TATTAGTTTT
GCTTTAGTTT CCCTCAGCAA AGGAATTATT TTAGGATTAC TTTTAGGAGC GATCGCTTTT
TTGTTTCTCT GGTGGGATAC TCCCCGACTA TTAAGCAATA AATATTTTTG GAGTGGTATC
CTATTAGGTA TGTTACCAGT TTTTCTATGG TACACAGCTC AATTTTTTCA TTACGGCGTT
GAATTTTTCT ATGCCAACTT TTTCCATCAA TCTTTAAAAC GTATTTGGCA ACAAGTAGGT
AATCATGATG GACCTATTTG GTATTATTTA TTAGAAATTA TTAAGTATAG TTTTCCATGG
CAGCTATTCT GGTTACCAGG ATTATATTTG AGTTGGAAAA ATCGTAGTCT GAGTTGGGGT
AAATTAGTTT TGATTTGGAC TGGAGTTTAT CTGTTTGCTA TTTCATTAAT GAATACAAAA
CTTCCTTGGT ATGTGTTACC TATTTATCCA GCTTTTGCCT TAGCAGTAGG TAGTTATATA
ACAGAAATCT GGGATCAATT TCCATTAGAC TTAGGATGCT TTTGGTTTTC AGGTGATAAA
TATCTTCCAA CTCACGGAGA TCATAAAAAA CATCTCTGGA GTCTTCCCAC TATTTACCAT
CGTTTAGTAG TAGCTTTATT TGCACTACTA GCAATAATAG CTTGGGCTGC TTCTGTTTAC
TTTAGTGGGA TTTTTGATCT AGGGGAGCAA AATTTAGCAA AACCTAACTT ACAGTTACAG
TTAGTTGCTG TGGCTCTTGC ATTGACAATG ACAATGGTAA CTCTACTGTT AAATAAACAA
CAGCATCAAT TTTTATTAAT TTTGATTTGG GGAACATATC TTTCACTGCT AATGTTTGTT
AGCTCTCCTT ATTGGATATG GGAATTGGAA GAAAATTATC CAGTCAAACC AGTCGCAGAA
ATGATTCAGA AAGATACCCC CCCGGGTCAG GTTATTTATT CTTTTGACAC TAAAGACCGT
CCCTCTTTAA ATTTTTATAG CGATCGCCTC ATTAAGCGTG TTGGCCCAAA AAAAATTCAA
CAGCAATGGC AAAAAACAAC TCAACCCTAT TTATTAGTTG AAGCATTAAC TCTAAATAAT
CTCCCCCTAG AAAATTTTCA GGTTTTGAAT ACTGTCAAAG GATGGTCCTT AGTTACAAGA
GAAGGTAAAA GATAA
|
|---|
| Protein sequence | MLNKILTKKN LHSHIDLLLT LGLLLAAVVL FSTNLGTLPL RDWDEGIVAQ VAREISRDKW
NWLYPTINNT PYFNKPPLIH WLIAFIYSIA GVNEFNARLF PALLTAFSVP LIYGISRELF
HPRTPAIFTA LVYLTLLPVV RHGRLAMLDG AVVCFFLLMI WCVLRSRQNL RYSLPIGISF
ALVSLSKGII LGLLLGAIAF LFLWWDTPRL LSNKYFWSGI LLGMLPVFLW YTAQFFHYGV
EFFYANFFHQ SLKRIWQQVG NHDGPIWYYL LEIIKYSFPW QLFWLPGLYL SWKNRSLSWG
KLVLIWTGVY LFAISLMNTK LPWYVLPIYP AFALAVGSYI TEIWDQFPLD LGCFWFSGDK
YLPTHGDHKK HLWSLPTIYH RLVVALFALL AIIAWAASVY FSGIFDLGEQ NLAKPNLQLQ
LVAVALALTM TMVTLLLNKQ QHQFLLILIW GTYLSLLMFV SSPYWIWELE ENYPVKPVAE
MIQKDTPPGQ VIYSFDTKDR PSLNFYSDRL IKRVGPKKIQ QQWQKTTQPY LLVEALTLNN
LPLENFQVLN TVKGWSLVTR EGKR
|
|---|
| |