| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3452 |
|---|
| Symbol | |
|---|
| ID | 4243396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5276368 |
|---|
| End bp | 5277183 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638108428 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_723017 |
|---|
| Protein GI | 113476956 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01548] haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.23904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATA AAGCAATTTT AGTTTTCGAT GTTGATGGTG TAATTCGAGA TGTGGGTAGG
TCTTATCGAC GGGCGATCGC GGATACGGTA AAGCATTTTA CATGGGGGGC GTTTTGCCCC
ACTTTGGTAG ATATTGATGA GCTTAAGTCT GAGGGAGTTT GGAATAATGA CTGGGAAGCT
TCCCAAGAAT TAGTCTATAG GTATTTTGAG GGTCAAGGTA AAAAACGGGA GGATATAGAT
TTAGATTATC AAAAGTTAGT AGCTTTTTTT CAGGCTCGTT ATCGGGGGGT GGATGAGAAT
AACTGGAATG GTTATATTTG TTCGGAACCT TTGTTAATAA GTTCTAGTTA TTTTGAGGGT
TTGACGGAAG CTGGTTTGTT TTGGGGGTTT TTTAGTGGAG CAATGAGACC GGAAATAGCT
TATGTTTTGG AGAGAAAGTT AGGGTTGAGT TCTCCAGTGG TGGTAGGGAT GGAAGATGCG
CCAGGAAAAC CTGACCCGAC AGGGTTGCTG GCTGTAGTAG AGGAGTTGGA AAAACGACAT
GGTTTGCCTG AAAATCTACC TGTCATTTAT GCTGGTGATA CAGTTGGAGA TCTATATACG
GTACAGAATG CTCGTCAGCA GAGGCCATTG AGAACTTGGG TCGGAGTGGG TGTGTTGCCA
CCTCATGTGC AGGAAAATGA CGAAAGACAG TATGTTTATC TTGGTAAGTT ATTGGAGGCA
GGGGCAAAAG TTGTTTTGAA TAGTATTGAA GAGTTGTCTA TAGGGGCGAC GGATAATGAG
AAGCTTTTTG ATGTTCTATT GCACCAAAAG GGTTAG
|
|---|
| Protein sequence | MMNKAILVFD VDGVIRDVGR SYRRAIADTV KHFTWGAFCP TLVDIDELKS EGVWNNDWEA
SQELVYRYFE GQGKKREDID LDYQKLVAFF QARYRGVDEN NWNGYICSEP LLISSSYFEG
LTEAGLFWGF FSGAMRPEIA YVLERKLGLS SPVVVGMEDA PGKPDPTGLL AVVEELEKRH
GLPENLPVIY AGDTVGDLYT VQNARQQRPL RTWVGVGVLP PHVQENDERQ YVYLGKLLEA
GAKVVLNSIE ELSIGATDNE KLFDVLLHQK G
|
|---|
| |